Magallana gigas (Pacific oyster): 117680334
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Entry
117680334 CDS
T03920
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
117680334
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117680334
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_9
Motif
Other DBs
NCBI-GeneID:
117680334
NCBI-ProteinID:
XP_034300323
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Position
LG7:complement(33059686..33062051)
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AA seq
723 aa
AA seq
DB search
MTKAQMLFLAFVLVYESVHPKLCERNEKPPDGCTCTKYKGKQYYVTINCINKGESPRSDT
IPSMPNNTYQLIIQGFRFINLTKKTFGNLRRLSSLHVLNLLDNNIITISHDALSELKHLK
ELEISWEIQVNRREISEMLSYITRNITFIKFSHNAWDQPPDFAGLWNATLRNLTLSYDYF
TALEGSNYSSLNQLRKLDVSYNGITENGVNFTGLENINELVLGGNWFKEFPKFCDYKFSN
LSTISFKNNKLTEFRSSYFQCLTNLQALNLNGHAIRKLYNNTFTNLTSLRQLYIQRLAGQ
LSHIEPEAFKSNSLQELRFSDNGFFFSDFPKETLIMFKYCPKLTLLDISANHLKLKENEL
TKMIKHLKNLTTLIIRNTGLHYLPRNLTRHLPMLRKLYASKNYLNGSWDGNSVFGNVPSL
QYLDLSKNYIERITQHNFPLTLLNGIKDNGLDLSYNKLSCNCDDALWFYNWMHANKKKLS
HVENITCRLNVPLDASTRNLFYLTEKELCPMNPAVFIAIISSGTALLVIFITLGTLYKLR
WHIRHWLYVIKYKNQGYEIIPNDPDFKYDVFLVYADEDTKFIFKIVVPYLEGKGYSLCVR
CRDFEIGKLYCDNIVDNMNLSRRILLILSNNFAKSKWCEFQMNFAYNRCLDEKINNIIVA
VWKEISYKYLSNTLKVLLTSYDYALWSKSDATGRSLFWGKILRKLQFQSDDTECTNGLLV
VLR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagcacagatgttgttccttgcctttgtgttggtgtacgaaagtgtacatcca
aagctatgtgagcgaaatgaaaaaccgcccgatgggtgtacatgtacaaaatataaaggt
aaacagtattacgtgacaattaattgcatcaataaaggagaaagtccacgaagtgatact
attccctcgatgccaaacaatacttaccagttaatcattcaaggatttcgattcataaat
cttactaagaaaacgttcggtaatttgaggagactttcttccctgcatgtattaaattta
ctggataataacatcatcaccatttcccatgatgctttatccgaattgaaacatttaaag
gaattggagatcagctgggaaatccaagtgaataggagagaaatatcagagatgctttct
tacatcactcgcaacattacgtttatcaaattctcccataatgcctgggaccaaccgcct
gattttgctggactgtggaatgcaacacttcgaaatttaaccctgtcctatgattatttc
actgcattggaaggttctaactattccagtttaaatcaacttcgcaagttagacgtatca
tacaatggaattacggaaaatggggttaattttactggtcttgaaaatatcaacgaattg
gttttgggtggaaactggtttaaagaatttccaaagttttgtgactataaattttctaat
ttgtcaacaatctcgtttaagaataataaattaactgaatttagatcatcatattttcaa
tgtttaacaaatttgcaagccttgaatctaaatgggcatgcaataagaaagttgtataac
aatacatttaccaatctgacgtcattgcgtcaactttacatacagcggttggctggacaa
ctttcccacattgaaccagaagcgtttaaaagcaactcccttcaagaactcaggttttct
gataatggatttttcttttccgatttccccaaagaaaccctcattatgttcaaatactgc
ccaaaattgaccttactagatatttcagcaaaccatcttaaattaaaggaaaatgaactc
acaaagatgataaaacacttgaaaaatcttacaacacttattattagaaatacaggatta
cactaccttcctagaaatttgacacgtcatttgccgatgttaaggaaactttacgcttcg
aaaaactatttaaacggatcatgggacgggaattctgtatttggaaacgtcccatctttg
caatatctggatttgtcgaaaaactacattgaaagaatcactcaacataattttccacta
actctattgaatggaataaaagacaacgggttagatcttagctataataaactctcttgc
aattgcgatgacgcgctatggttttacaattggatgcatgccaataagaaaaagttatca
catgttgaaaatataacatgtcgactcaatgttcctcttgatgcgagcacgagaaatttg
ttctatctcaccgaaaaagaactgtgtccaatgaatcctgctgtgttcattgctatcata
agttcaggtaccgccttattggtgatttttatcacgttgggaactttatacaagcttcgc
tggcatatacgtcactggctttacgtcataaaatataaaaaccaggggtacgaaatcata
ccgaacgaccccgattttaaatatgacgtatttttagtttatgccgatgaggataccaag
tttatttttaaaattgttgtgccatatttggaaggaaaaggctacagtttgtgtgtgaga
tgtcgggactttgagataggaaagttgtattgtgacaacatagttgacaacatgaatctc
agcagacgtattctattgattctgtctaacaattttgccaaaagcaaatggtgtgaattt
cagatgaattttgcatataacaggtgcttggatgaaaaaataaacaacataattgtggcg
gtttggaaagaaataagctacaagtatttatcaaacaccctcaaagtcttgttgacgtca
tacgactatgctctttggtcgaagtccgatgcgactggacgaagtttgttttgggggaag
attttgcggaaattacaatttcaatctgacgacaccgaatgtactaatggtctgctcgtt
gttctccgatag
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