Chryseobacterium rhizoplanae: KB553_05915
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Entry
KB553_05915 CDS
T08349
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
crhi
Chryseobacterium rhizoplanae
Pathway
crhi00020
Citrate cycle (TCA cycle)
crhi00480
Glutathione metabolism
crhi01100
Metabolic pathways
crhi01110
Biosynthesis of secondary metabolites
crhi01120
Microbial metabolism in diverse environments
crhi01200
Carbon metabolism
crhi01210
2-Oxocarboxylic acid metabolism
crhi01230
Biosynthesis of amino acids
Module
crhi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
crhi_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
crhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KB553_05915
09106 Metabolism of other amino acids
00480 Glutathione metabolism
KB553_05915
Enzymes [BR:
crhi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
KB553_05915
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Gene cluster
GFIT
Motif
Pfam:
IDH
RRM_5
Motif
Other DBs
NCBI-ProteinID:
UCA61064
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All DBs
Position
1289507..1291723
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AA seq
738 aa
AA seq
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MSEKSKIYYTLTDEAPMLATHSFLPIVKAFTKSADIEIAVPDISLAGRILANFPEFLKDD
QKIGDALAELGELATQPDANIIKLPNISASVPQLDEAIAELQGKGFAVPNYPAEPKNDEE
KAIKAKYAKVLGSAVNPVLREGNSDRRAPKAVKNYAKANPHRMGDWASDSKTDVAHMNNG
DFYGTETSTTLENATKYRIVFKGNEGETVLKDFAGLQAGEVIDSSVMNLNALKAFVQEAI
EEAKKRNVLLSAHLKATMMKISDPIIFGAIVETFFKDVFTKYAETFKSLDINPNNGLADL
FEKIKGNAQEADIKADIEKTLAEGPRVAMVNSDKGITNFHVPSDIIVDASMAALVRGGGK
MWNKDGNEEDTVCIIPDRSYAGFYQSVIDDMKAHGKLDPTTMGSVPNVGLMAQKAEEYGS
HDKTFQLSADGTVEVQDEAGNVLLSQKVEKGDIFRMCQTKDAPIQDWVKLAVNRARLSDT
PAIFWLDKGRAHDREIIKKVEKYLADHDTTGLDIRILDVKDAMTETLKRAREGKDTISVS
GNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHIEQFLEEGYLRWD
SLGEFLALQASLEHLAQTQGNTKSQVLADALDEANAKFLATDKSPARKVGQIDNRGSHFY
LAMYWAEALANQTADAELAAQFASVAAAMKENEEVINAELIGAQGKPQNIDGYYKPDTYK
TYAAMRPSTVLNEIIDGI
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaatcaaaaatttactacacattaacggatgaagcaccaatgctggctacc
cactcgtttttacctattgtaaaagctttcactaaatcagcagatatcgagattgctgtt
ccggatatttccctggcaggcagaatcttagctaactttcctgagttcttaaaggatgac
cagaaaattggtgatgctttggctgaattgggagaattggcaacccaaccggatgcaaac
atcattaaattaccaaatatttctgcttctgttcctcaattggatgaagcaattgctgaa
ctacaaggaaaaggtttcgcagtaccaaactatcctgcagagcctaagaatgatgaagaa
aaagcaattaaagctaaatacgcaaaggttttaggaagtgctgtaaaccctgtattaaga
gaaggaaactctgacagacgtgctccaaaggctgttaaaaactatgcaaaagcaaatcct
cacagaatgggtgattgggcttctgacagcaaaactgatgtagctcacatgaacaatggt
gatttctacggaacagaaacttctacaacgttagaaaacgctacaaaatacagaatcgta
ttcaaaggaaatgaaggagaaacagtattgaaagactttgcaggtcttcaggctggtgaa
gtgatcgattcttctgtaatgaacctgaatgctttgaaagctttcgttcaggaagctatt
gaagaggctaagaagagaaatgtacttctttctgcccaccttaaggctacgatgatgaaa
atctctgaccctattatttttggggctattgtagaaactttcttcaaagatgtattcact
aaatacgctgagacgttcaagtctttagatatcaatccgaataacggactggctgatctt
tttgagaaaatcaaaggaaatgctcaggaagctgacattaaagccgatattgaaaaaact
ttggctgaaggaccaagagtggcaatggtaaattctgacaaaggaattacaaacttccac
gttccttctgatatcattgtagatgcatctatggctgcccttgtaagaggtggaggtaaa
atgtggaacaaagacggaaatgaagaggatacagtttgtatcattcctgaccgttcttac
gctggtttctatcagtctgtcattgatgatatgaaagcgcatggaaaattagaccctact
acaatgggatctgttccaaacgttgggttgatggctcaaaaagctgaagaatatggttct
catgataaaactttccaattatctgctgacggaactgtagaggttcaggatgaagctggg
aatgttcttctttctcagaaagtagaaaaaggggatatcttcagaatgtgccagactaaa
gatgctcctatccaggactgggtaaaattagcggtaaacagagcaagactttctgatact
cctgctattttctggttggataaaggaagagctcacgacagagagatcatcaaaaaagta
gaaaaatatcttgcagatcatgatacaactggtcttgacatcagaattcttgatgtaaaa
gatgctatgactgaaacgcttaaaagagccagagaaggaaaagatacaatttctgtttca
ggaaacgtattgagagattacttaacagaccttttcccaatccttgaacttggtacttct
gctaaaatgctttctattgttccattaatgaatggtggcggattatttgaaacaggtgcc
ggaggttctgctccaaaacatattgagcagttccttgaagaaggatatctaagatgggat
tctctaggtgaatttttagcactacaggcttctttagagcatttggcacaaactcaggga
aatacaaaatctcaggttttagcggatgcattggatgaagctaacgctaaattcttagct
actgataaatctcctgcaagaaaagtaggtcagatagacaacagaggttctcacttctat
ttagcaatgtattgggctgaagctttggccaaccaaactgcagatgctgagttagctgct
cagtttgcttcggttgccgctgctatgaaggaaaacgaagaagtaatcaatgctgaatta
attggcgctcaaggtaaacctcagaatattgacggttactataaacctgacacgtataaa
acatacgctgccatgagaccaagcacagttttaaatgaaattattgacggaatctaa
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