Cylindrospermopsis raciborskii: L3I90_12915
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Entry
L3I90_12915 CDS
T08337
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
crk
Cylindrospermopsis raciborskii
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crk03032
]
L3I90_12915 (topA)
03400 DNA repair and recombination proteins [BR:
crk03400
]
L3I90_12915 (topA)
Enzymes [BR:
crk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
L3I90_12915 (topA)
DNA replication proteins [BR:
crk03032
]
Prokaryotic type
DNA Topoisomerases
L3I90_12915 (topA)
DNA repair and recombination proteins [BR:
crk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L3I90_12915 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UJS03999
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Position
2931675..2934326
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AA seq
883 aa
AA seq
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MSTLVIVESPTKARTIRNYLPKDYQVEASMGHVRDLPQSASEIPATVKGEKWARFGVNIE
ADFEPVYVVLKDKKKVVSQLKEALKTANELILATDEDREGESISWHLYQLLKPKVPTKRM
VFHEITQEAIKKALANCRTIDDQLVRAQETRRILDRLVGYTLSPLLWKKISWGLSAGRVQ
SVAVRLLVNKERQRRAFREGTYWDLKASLLQAKSPFTSVLITLEGTKVATGSDFDPATGQ
IAAGRNVVLLNEEQALALQERLEGKTWTVTDIEERPVIRKPAPPFTTSTLQQESNRKLRL
SARDTMRIAQNLYEQGYITYMRTDSVHLSEQAIAAARACVTQKYGQEYLSPQPRQYTTKS
KGAQEAHEAIRPAGSTFRTPQETGLSGREFAVYDLIWKRTIASQMADSRQIQIAVHLKVE
EAGFRSSGKRIDFPGYLRAYVEGSDDPEAALEDQEVILPPLKVGDHPQCTELEAVGHETQ
PPARYTEATLVKTLESEGIGRPSTYASIIGTIVDKGYAQLVSNALIPTFTAFAVTSLLEQ
HFPEIVDPSFTSKMEQTLDEIATGEAEWLPYLRKFYLGEKGLQALVQEQEDQIDPSKAKT
VELENLNAKVRIGKFGPFIEVENEGGIVTASIPKDITPADLDPEQVDMLLRQKTVGPDQL
GTHPDTGEPIYLKIGTYGPYIQLGDKTDENPKPKQASLPKGVTQENLTLDMAVGLLSLPR
HLGEHPETGAKIQASLGKFGPYVVHDQGKDGKDYRSLKVGDDVLTISLERALELLAEPKK
ARSSRNSKSKTALRELGLHPEDDAPVNIYNGEYGYYINHGKTNVGLPEGQTVESVTLSQA
LELLKAKTSSKSRSKTTSTTKKSTTAKTKSTTTKSTSRSQKKG
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacccttgttattgttgaatctccaaccaaagcccgtactattcggaactacctg
ccaaaagactaccaggtagaagcttctatgggtcatgtccgtgacttacctcagtctgct
agtgaaatccctgctactgttaagggggaaaaatgggctcggtttggggtaaatatagaa
gcagattttgaaccagtatatgttgttcttaaagataaaaagaaagtcgtcagtcaacta
aaggaagctttaaaaactgccaatgagttgattttagcaactgacgaagaccgggaaggt
gaaagtataagctggcatttatatcagttacttaaacctaaagtgcctaccaaacgcatg
gtatttcacgaaattacccaggaagcaattaaaaaggctttagccaactgcagaactatt
gatgatcaattagtccgcgctcaggaaactagacgtatcttagaccgtctggtgggatat
actctctctcctctgctatggaagaaaatttcctggggactttctgcgggtagagttcaa
tctgtagcagtgcgcctactagtaaataaagaacgtcaacgtcgagcttttcgtgaaggt
acttattgggatttaaaagctagtctgttacaagcaaaaagccctttcacctcggtgtta
atcaccttagaaggaacaaaagtagccacgggtagtgattttgatcccgctacaggacaa
atcgctgcaggacgtaatgtggtcctactaaatgaggagcaggctttagcactccaggaa
cgtttggaaggcaaaacttggactgtgacggatatagaagaacgtcccgtgatccgaaaa
cccgctccaccatttactacctccactttgcagcaggagtctaaccgaaaactacgttta
tccgctagggatacaatgcggatcgcccaaaatctctatgagcaaggatatatcacctac
atgcggacagattctgtacatctgtcagaacaggcgatcgccgcagctagagcttgtgta
acccagaagtatggtcaggaatatctcagtcctcagcctagacaatataccaccaagtct
aaaggtgcccaagaagctcatgaggcaattcgccctgctggtagcacatttcgcactccc
caggaaactggtttaagtggacgagaatttgcggtttacgatttaatttggaagcgtact
attgcttcccaaatggctgactctcgccaaatccagattgctgttcacctaaaagtagaa
gaggctggattccgctcttctggtaaacgtatagattttcctggctatcttcgtgcttat
gtagaaggatcggacgacccggaagctgcactggaagatcaagaagtgatattacctcct
ttaaaagtaggtgatcatccccaatgtacagaattagaagcagtgggacatgaaacccaa
cctccagctagatatacagaagcaactttggtgaaaactctagaaagtgaagggattggt
cgtcccagcacctacgccagtattattggcaccattgttgataaaggttatgctcaactg
gtaagtaatgcgctaattcctacttttactgcctttgctgttaccagtttattagaacaa
catttcccggagattgtggatcccagttttacctcgaaaatggagcaaactctggatgaa
attgccactggtgaagctgaatggctaccctatctgcggaaattctatttaggggagaaa
ggtttacaggccctagtgcaagaacaagaagatcaaattgaccctagcaaagccaaaacc
gtagaattagaaaaccttaacgccaaggttcgcattggcaagtttggtccatttattgag
gtagaaaatgaaggagggatagtaacagcgtctattcctaaagacattacaccagcggat
ttagaccctgagcaggtggatatgctactgcgacaaaaaaccgtgggaccagatcagttg
ggaacacacccagatacaggtgaacccatttacctgaaaattggcacctatggaccctat
atccaattaggagataaaaccgacgaaaatcccaaaccaaaacaagcttcccttcctaaa
ggtgttacccaagaaaacctcactttggatatggctgtgggtttattgtcattgcctcga
cacttaggagagcatccagaaacgggagcaaaaattcaagctagtttaggcaagtttgga
ccttatgtagttcatgatcaggggaaagatggtaaagattaccgctcactaaaggtgggt
gatgatgtgttgacaatttctctagaacgcgcattggaattattagcagaacccaaaaaa
gccagaagttcaagaaatagtaaatccaagactgctctacgagaattaggtttacatccg
gaagatgatgcacctgtgaatatttataacggtgaatacggttattatattaatcacggt
aaaaccaacgtcggtctaccggaaggtcaaacagtagaaagtgttactctcagccaagct
ctagaattgttaaaagctaaaacctctagtaagtccaggagtaaaactactagcacaacc
aagaaatcaactactgccaaaaccaagtcaaccaccacaaaatccaccagtaggagccaa
aagaaaggctag
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