Citrobacter rodentium: ROD_04231
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Entry
ROD_04231 CDS
T01145
Symbol
ddlA
Name
(GenBank) D-alanine:D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cro
Citrobacter rodentium
Pathway
cro00470
D-Amino acid metabolism
cro00550
Peptidoglycan biosynthesis
cro01100
Metabolic pathways
cro01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ROD_04231 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ROD_04231 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
ROD_04231 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
ROD_04231 (ddlA)
Enzymes [BR:
cro01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
ROD_04231 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
Precursor biosynthesis
Amino acid ligase
ROD_04231 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATPgrasp_ST
ATP-grasp_3
ATP-grasp_4
RimK
NHase_alpha
GARS_A
Motif
Other DBs
NCBI-ProteinID:
CBG87204
UniProt:
D2TKW3
LinkDB
All DBs
Position
complement(474479..475573)
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AA seq
364 aa
AA seq
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MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFEVVLLGIDKQGQWHVSDAANYLLN
ADDPAHIALRPSATRLAQVPGQHEHQLIDARTATPLPTVDVIFPIVHGTLGEDGSLQGML
RVANLPFVGSDVLGSAACMDKDVTKRLLRDTGLNIAPFVTLSRANRHTFSFADIKARLGL
PLFVKPANQGSSVGVSKVTNEAQYAQAVALAFEFDHKVVVEQGIVGREIECAVLGNDRPQ
ASTCGEIVLNSDFYAYDTKYIDDNGAKVVVPATIDPQINDKIRDIAIQAYQTLGCAGMAR
VDVFLTAENEVVINEINTLPGFTNISMYPKLWQASGLSYTDLISRLIELALERHAADNAL
KTTI
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaattgcgggtaggaatcgtatttggcgggaaatcagcggaacatgaggtgtct
ttgcaatcggcaaaaaatattgtcgatgccatcgacaagacccgctttgaggttgtgctg
ttaggtattgataaacaggggcagtggcacgtcagcgatgcggccaactacctgctcaac
gcggacgatcccgcgcacattgcgctgcgtccttccgccacccgtcttgcccaggtgccg
ggtcaacatgaacaccagcttattgatgcccggaccgccacgcccctgccgacagtggat
gtgatattcccaatcgtccacggtacgctgggcgaagatggttcgctacaggggatgctg
cgggtggcgaatctgccgttcgtcggttccgatgtgctgggctcggcggcttgcatggac
aaagatgtgactaaacgcctgctgcgcgacaccgggctgaatattgcgccattcgtgact
ctcagccgggccaatcgccatacttttagctttgccgatataaaagcgcgtctcggcctg
ccgctgttcgtgaagccagccaaccagggctcttccgtcggtgtcagtaaagtgaccaac
gaggcgcagtacgcccaggccgtcgcgctggcgttcgaattcgatcataaggtagtggta
gaacaagggatcgtcgggcgcgaaattgaatgcgcggtgctgggtaacgatcgtccacag
gccagtacctgcggcgaaatcgtgctgaacagcgatttttacgcttacgacaccaaatac
atcgacgataacggtgcgaaagtggtggtgcctgcgacgatcgatccgcagatcaacgac
aagatccgtgatattgccatccaggcttaccagacgctgggctgtgccggtatggcgcgc
gtcgatgtctttttgaccgcggaaaatgaagtggtgatcaatgagatcaacacgctgccg
ggctttaccaacatcagtatgtacccgaaactctggcaggccagcgggttaagctatacc
gatctgatcagccgtttgattgaactggcgctggagcgacacgctgcggataacgcgctg
aaaacgacaatctaa
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