Citrobacter rodentium: ROD_08461
Help
Entry
ROD_08461 CDS
T01145
Symbol
deoR
Name
(GenBank) deoxyribose operon repressor
KO
K11534
DeoR family transcriptional regulator, deoxyribose operon repressor
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cro03000
]
ROD_08461 (deoR)
Transcription factors [BR:
cro03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
ROD_08461 (deoR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_23
HTH_11
HTH_Mga
Sigma70_r4
HTH_17
HTH_31
Motif
Other DBs
NCBI-ProteinID:
CBG87623
UniProt:
D2TQF7
LinkDB
All DBs
Position
complement(934909..935667)
Genome browser
AA seq
252 aa
AA seq
DB search
METRRDERIGQLLQALKRSDKLHLKEAAALLGVSEMTIRRDLNSHSAPVVLLGGYIVLEP
RGASHYLLSDQKSRLVEEKRRAAQLAATLVQPHQTLFFDCGTTTPWIIEAIDNDMPFTAV
CYSLNTFLALQEKPLCRAILSGGEFHASNAIFKPLDTQETLSHICPDIAFYSAAGIHLSK
GATCFNLEELPVKHWAMARAQYHALVADHSKFGKVRPARMGDLTRFDAVISDRCPDDEFV
DFAKAQDIKLMY
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgtcgcgatgagcgtattggtcaactgctgcaggcgctgaagcgcagcgat
aaactccatctgaaagaggcagcggccctgctcggcgtctctgaaatgaccattcgtcgc
gacctgaatagccacagcgcgccggtggtactgttggggggctacatcgtactggagccg
cgcggcgccagccactatctgttaagcgaccagaagtcccgcctggtcgaagagaaacgt
cgcgccgcgcagctggcggccacgctggtgcagccgcatcagacgctgttttttgactgc
ggcaccaccacgccgtggatcatcgaagcgatcgataatgatatgcccttcaccgcggtg
tgttactccctgaatacatttctggccttgcaggaaaaaccgctgtgccgggccattctc
tccggcggcgaatttcacgccagcaacgcgattttcaaaccgctcgatacccaagaaacg
ctcagccatatctgcccggatatcgccttttattccgccgcgggcattcacctcagcaaa
ggcgcgacctgctttaatctcgaagagttaccggtgaagcactgggcgatggcgcgggcg
cagtatcatgcgctggtggcggatcacagcaaattcggcaaagtgcgcccggcgcggatg
ggcgacttaacgcgctttgacgcggtgatcagcgaccgttgcccggacgatgagtttgtc
gacttcgccaaagcgcaggacatcaaattgatgtattga
DBGET
integrated database retrieval system
