Citrobacter rodentium: ROD_15481
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Entry
ROD_15481 CDS
T01145
Name
(GenBank) putative LysR-family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cro03000
]
ROD_15481
Transcription factors [BR:
cro03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ROD_15481
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
CBG88312
UniProt:
D2TII5
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Position
complement(1647457..1648347)
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AA seq
296 aa
AA seq
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MRMSIKQLRAFLAVAHTLNFAHASERLNISQPALSLTIKGLEESLGGPLLLRTTRKVTLT
QEGETLLTMARQLIADWDNTEEAMRQRFTLQRGKVSVAAMPSFAANVLPPALKTFRDRYA
GINVTVHDVINEQVIEMVSEGRVEMGIAFEPDYSGHLHFTPLGLDRFVAIVPPGSRFAER
ERISWRELLSLDFIALQRPSAVRLMLEEQLAQSGRPLKVALESHQLVTIGRLVANGLGGS
AVPALCHRQMTELGAVCLALDGPVIERRVGVLRSAHHKLSTAAQALLETLKSAYSA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgagcatcaaacagttacgcgcatttttagcggtagctcacactctgaatttc
gcccatgccagcgagcggttgaatatatcccagccggcgctgagtctgacgattaaaggt
ctggaagagtcgttaggcgggccattgctgttaaggacgacgcggaaggtcacgctgacc
caggagggagaaacgctgctgacgatggcccgccagcttattgccgactgggataacacc
gaagaagcgatgcgccagcgctttacgctacagcggggaaaggtatcggtggcggcaatg
ccctcctttgcggcaaacgttctgccgccggcgctgaaaacctttcgcgaccgctacgcg
gggatcaacgtcaccgttcatgatgtgatcaacgaacaggttattgagatggtcagcgag
gggcgggtggagatggggattgcctttgagccggattactccggccatctgcactttacg
ccgcttggcctggatcgctttgtcgccatcgtgccgcccggttcccgcttcgctgagcgg
gaacgtatttcgtggcgcgaactgctgagcctggattttatcgctctgcaacggccttcc
gcggtgcgtctgatgctggaagagcagctggcgcaaagcggccgcccgctgaaggtggcg
ctggaaagccatcaactggtcactattggccgtctggtcgctaatggactgggcggtagc
gcggtgcccgcgctgtgtcaccggcagatgacggagcttggcgcggtgtgtctggcgctg
gacggtccggttattgagcgcagagtaggcgtactgcgttcagcgcatcataaactttcc
accgccgcgcaggcgctgttagagaccctgaaaagcgcctacagcgcgtaa
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