Citrobacter rodentium: ROD_39091
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Entry
ROD_39091 CDS
T01145
Symbol
fadB
Name
(GenBank) fatty oxidation complex subunit alpha [includes: enoyl-CoA hydratase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3 hydroxybutyryl-CoA epimerase]
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cro
Citrobacter rodentium
Pathway
cro00071
Fatty acid degradation
cro00280
Valine, leucine and isoleucine degradation
cro00310
Lysine degradation
cro00362
Benzoate degradation
cro00380
Tryptophan metabolism
cro00410
beta-Alanine metabolism
cro00640
Propanoate metabolism
cro00650
Butanoate metabolism
cro00907
Pinene, camphor and geraniol degradation
cro00930
Caprolactam degradation
cro01100
Metabolic pathways
cro01110
Biosynthesis of secondary metabolites
cro01120
Microbial metabolism in diverse environments
cro01200
Carbon metabolism
cro01212
Fatty acid metabolism
Module
cro_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
ROD_39091 (fadB)
00650 Butanoate metabolism
ROD_39091 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
ROD_39091 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
ROD_39091 (fadB)
00310 Lysine degradation
ROD_39091 (fadB)
00380 Tryptophan metabolism
ROD_39091 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
ROD_39091 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
ROD_39091 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ROD_39091 (fadB)
00930 Caprolactam degradation
ROD_39091 (fadB)
Enzymes [BR:
cro01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
ROD_39091 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
ROD_39091 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
ROD_39091 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
ROD_39091 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
CBG90613
UniProt:
D2TUY9
LinkDB
All DBs
Position
4128224..4130413
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGQALDVLEKQTDLKGLLLRSN
KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGAEQALK
IGLVDGVVKPEKLVEGALAVLRQAINGDLDWKAKRQPKLEPLKLSKIEATMSFTIAKGMV
AQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQFVK
GKAKKLTKDVQTPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLTLGMNEAAKLL
NKQLERGKVDGLKMAGVISSIHPTLDYAGFERVDVVVEAVVENPKVKKAVLAETEEKVRP
DTVLASNTSTIPISELASVLKRPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAW
ASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKP
KKEEDATVESLLADVSNAKHDFSDEEIIARMMIPMVNEVARCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSARYFDMAQQYQHLGPLYAVPEGLRNKARHNEPYYPPVEPA
RPVGSLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaaaggcgacaccctgtacctcgactggctggaagatggcatcgccgaactg
gtgttcgatgcccctggctcggtcaataaactcgacactgcgaccgtcgccagcctcggc
caggcgctggatgtactggaaaagcaaacagatttaaaagggctgctgctgcgttcgaat
aaagcggcctttattgtcggtgcggatatcaccgaattcctttcgctgttccttgttcct
gaagaacagttaagccagtggctgcatttcgccaacagcgtctttaaccgtctggaagat
ctgccggtgccgaccctctccgccgtcaacggctatgcgttgggcggcggctgcgaatgc
gtgctggcgaccgactaccgtctggcgacgccggatctgcgcatcggcctgccggaaacg
aagctggggatcatgcccggcttcggcggttccgtacgtatgccgcgtatgctcggcgcg
gacagcgcgctggaaattattgccgccggtaaagacgtcggcgcggagcaggcgctgaaa
atcggcctggtcgacggcgtggtgaagcccgaaaaactggttgaaggcgcgctggcggtt
ttacgccaggcgattaacggcgatctggactggaaagccaaacgccagccgaagctggag
ccgctgaagctcagtaagattgaagccacgatgagttttaccatcgccaaaggcatggtc
gcgcagacggcgggcaagcattacccggcccccatcaccgcggtaaaaaccattgaggcg
gcagcgcgttttggtcgtgaagaagcgctgaatctggaaaacaaaagctttgttccgctg
gcgcacaccaatgaagcccgcgcgctggtcggtattttcctgaacgatcagtttgttaaa
ggcaaggcgaagaagctgaccaaagatgttcagacgccgaagcaggctgccgtactgggc
gccggtattatgggcggcggtatcgcttatcagtcggcgtggaaaggcgtgccggtgatc
atgaaggatatcaacgacaaatcgctgacgctggggatgaacgaagccgccaagctgctg
aataaacagcttgaacgcggtaaggttgacggcctgaagatggcgggcgtgatttcgtcg
attcatccgaccctcgactacgccggttttgaacgcgtggatgtggttgtcgaagcggtg
gtcgagaatccgaaagtgaaaaaagcggtactggcggagaccgaagaaaaagtccgtccg
gataccgtactggcctcgaacacctcgaccattcccattagcgaactggcaagcgtgctg
aaacgcccggaaaacttctgtgggatgcacttttttaatccggttcaccggatgccgctg
gttgaaattattcgcggagagaaaagctcggatgaaaccatcgctaaggtggtcgcctgg
gcaagccgtatgggtaaaacgccgatcgtggtcaacgactgccccggcttctttgttaac
cgcgtgctgttcccttacttcgctggcttcagccagctgctgcgcgacggcgcggacttc
cgcaaaatcgacaaggtgatggaaaagcagtttggctggccgatgggcccggcgtacctg
ctggacgtggtgggcattgataccgcgcatcatgctcaggcggtaatggccgctggcttc
ccacagcgaatgcagaaagattatcgcgacgcgatcgacgccctgtttgacgccaaccgt
tttggccagaaaaacggcctcggattctggcgttataaagaagacagcaaaggcaagccg
aagaaagaagaagacgctaccgtagagagcctgctggccgacgtcagcaatgcgaagcat
gacttcagcgatgaagagatcatcgcccgcatgatgatcccgatggtcaacgaagtggcg
cgctgtctcgaagaaggcattatcgccagcccggcggaagccgatatggcgctggtctac
ggcctgggcttcccgccgttccacggcggcgcgttccgctggctggatacgctcggcagc
gccagatatttcgatatggcgcaacagtaccagcacctcggcccgctgtatgccgtgccg
gaaggtctgcgtaataaagcgcgtcataacgaaccgtactatcccccggttgagcctgcc
cgtccggttggttccctgaaaacggcttaa
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