Citrobacter rodentium: ROD_42381
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Entry
ROD_42381 CDS
T01145
Symbol
malS
Name
(GenBank) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
cro
Citrobacter rodentium
Pathway
cro00500
Starch and sucrose metabolism
cro01100
Metabolic pathways
cro01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
ROD_42381 (malS)
Enzymes [BR:
cro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
ROD_42381 (malS)
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
CBG90935
UniProt:
D2TJT7
LinkDB
All DBs
Position
complement(4468640..4470670)
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AA seq
676 aa
AA seq
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MKLAAVTLALLPAMGIASSWTSQGFPPFTAGGTGKFVSQTALTKGTRPLLLNFDQQCWQP
ADAVKLNQMLSLKPCEGAPPQWRLFKDGSYTLEIDTRSGTPTLMITIQNEAEPAARVIRQ
CPKWDGSPLTLEVAQTFPEGAVVRDFYSQQTATVKEGRITLQPAPDSNGLLLLERAETNA
PAPFDWHNATVYFVLTDRFVNGDPTNDHSYGRHKDGMEEIGTFHGGDLRGLTSKLDYLQQ
LGVNALWISAPFEQIHGWVGGGAKGDFPHYAYHGYYTQDWTRLDANMGNEEDLRALVDGA
HQRGIRVLFDVVMNHTGYATLADMQEFNFGALYLTGDELKKTLGERWTDWKPGAGQNWHS
FNDYINFSDKAAWEKWWGKAWIRTDIGDYDSPGFDDLTMSLAFLPDLKTESTVPSGLPVF
YQNKADTRAKAIDGYTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVELPAWQQLKTQASAA
LVEWKKANPDKAPDDKPFWMTGEAWGHGVMQSDYYRHGFDAMINFDYQEQAAKAVDCLAN
IDPVWQQMAEKLQNFNVLSYLSSHDTRLFREGNDNAAELLLLAPGAVQIFYGDESARPFG
PTGSDPLQGTRSDMNWQDISGKFAGNVAHWQRLGQFRARHPAIGAGKQTTLTLSQGYGFV
RTTGDDSVMVVWAGQR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgccgctgttacgctggcgctcctgcccgcgatggggatcgcctcatcatgg
acatcgcagggctttccgccgttcaccgccgggggtaccggtaagttcgtcagccagaca
gcgctaacgaagggtacccgccctttgttactcaattttgaccaacagtgctggcagcct
gccgatgcggtaaaactcaatcagatgctgtcgctgaagccctgtgaaggcgcgccgccg
cagtggcggctgttcaaagacggcagttacacgcttgagatcgacacccgttccggtacg
ccgacgctgatgattactattcagaacgaggcggaaccggccgccagggtcattcgccag
tgcccgaagtgggatggctcgccgctgaccctggaggtcgcgcagaccttcccggaaggc
gccgtagtgcgggacttctatagccagcaaaccgccacggtgaaagaaggcaggatcacc
ctacagcccgcgccggacagcaacggtctgctgctgctggaacgggcggagacgaacgcg
ccagccccgttcgactggcacaacgccacggtctactttgtgctgaccgaccgctttgtc
aacggcgatcccaccaacgaccacagctatggtcgccataaagatggcatggaagagatc
ggcaccttccacggcggcgatctgcgcggcctgaccagcaaactggactatttacagcag
ctgggcgtcaatgcgctgtggatcagcgcgccgttcgaacagattcacggctgggtcggc
ggcggcgccaaaggcgattttccgcactatgcttatcacggctattacacccaggactgg
acccggcttgacgccaatatgggcaacgaggaggatttacgcgcgctggttgacggcgcc
catcagcgtgggattcgcgtcctctttgacgtagtaatgaaccataccggctatgcgacg
ctggccgacatgcaggagtttaacttcggcgcgctctatcttaccggcgatgaactgaaa
aagacccttggcgaacgctggaccgactggaaacccggcgcaggacaaaactggcacagc
tttaatgattacatcaacttcagcgacaaagcggcgtgggaaaaatggtggggaaaagcg
tggatccgcaccgatatcggcgattacgacagccctggctttgacgatttgaccatgtcg
ctggcctttctgccggatttgaaaactgaatccaccgtaccgtccggcctgccggtgttt
tatcagaacaaagcagatacgcgcgccaaagccattgatggctatacgccgcgggactac
ctgacccactggttaagccaatgggtgcgcgactacggcatcgacggattccgcgtcgat
accgccaaacacgttgaacttccggcatggcagcagttaaaaacccaggccagcgctgcg
ctggtcgaatggaaaaaagccaacccggacaaagcgcctgacgataagccgttctggatg
accggcgaagcctggggccacggcgtgatgcaaagcgactactatcgccacggctttgat
gcgatgatcaattttgactatcaggagcaggcggcaaaagcggtggactgtctggcaaac
atcgatcctgtctggcaacaaatggcggagaaattacaaaatttcaacgtgctgagctat
ctgtcctcgcacgatacccgacttttccgcgaaggaaatgataacgcggcggagcttctg
ctgctggcgccgggggcggtgcaaatcttctatggcgacgaatccgcgcgtcctttcggc
ccgactggctcggacccgctacagggcacgcgctcggatatgaactggcaggacatcagc
ggcaaatttgccggtaacgtcgcgcactggcagcgcctcgggcagttccgggccaggcat
ccggcaatcggcgccggtaagcaaaccaccctgacgttatcccagggctacggctttgtg
cgcacgacaggtgatgacagcgtgatggttgtctgggccgggcagcgctaa
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