Caenorhabditis remanei (nematode): GCK72_010728
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Entry
GCK72_010728 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K12236
transcriptional repressor NF-X1
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crq03000
]
GCK72_010728
04121 Ubiquitin system [BR:
crq04121
]
GCK72_010728
Transcription factors [BR:
crq03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
GCK72_010728
Ubiquitin system [BR:
crq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
GCK72_010728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
Motif
Other DBs
NCBI-GeneID:
9811432
NCBI-ProteinID:
XP_003111731
UniProt:
E3LWW8
LinkDB
All DBs
Position
III:complement(11130163..11133787)
Genome browser
AA seq
1129 aa
AA seq
DB search
MADTIGTSSNITTTSSSSRPRSNRGRGGRSRQAPRQDGENSAENQDAAPSMNPRGGHQGF
NKNRRTRVQKDGPSGNRAETQISHTFNPNAATFNPSQSNTFNPNIPPPLLPSNSVDVPPN
QNIRQQNQNSRRRDGQQNNNPNSRRRDGQQNDQRRQTGNQEPREQQQNPMRQQNRNQQNP
QQNKNVNAGPSGQHQENRRNQGGFKRSQGARRREQREEPLTEEETKMLADKPLRERLVYL
LENNKYECAICYTRITTRQGVWSCKTCYHIFHISTGCITDWAKSSRDKEGANTWRCPTCQ
TENETMPYNYHCFCGRMRNPNFRVGEIPHSCGEICGGARKYGCPHPCNELCHPGPCVECK
LHVTKSCNCGKTKKSVRCGSGQNVMCDIVCGKSLSCGQHTCEKICHSGECGDCTVFLEQD
CFCGKLPKEVLCNPAAGEKYSCGSECDGMFVCGVHRCTKKCHDKECGECETGVHKIRTCP
CGRNTLQSLGIIRTKCTDAVPTCNSICDKWLTCGTPGKNHKCREKCHDGPCPPCSLNTSV
ICRCGTSKGVIPCDEYLEIMKTTGEYLCTKRCRKKKSCGMHKCQEVCCIQDEHYCLQMCN
KRLSCGIHTCENVCHAGQCRPCLQASFDEQFCHCGTTVRMPPIPCGARLPVCSQPCARPH
ICDHPVTHKCHGEQNCPPCTHLTDKTCYGGHTVRKNIPCHIESVSCGIVCQKPLKCGVHI
CQRSCHGDECEKEGEKCTKKCETIRELCEHPCALPCHESSPCEPSCCKANVRVTCECGRI
KKEAPCCEVDKMIQTKIEKEESDKADSGDEDKPGKLKRSSSFSQLNCMKCDDECKKLERN
RKVAEALEVDTDEYGMNKLAPTISFPCYLKEMVRTNLEFVKNVEKVFIDLVIKILSGEAY
HDVFRSHLPPMSIEKRRFVHEYANFFNITSESVDSPPKRSIVLTAVRGKSHQPLILISDL
VNFKGALKTPGPAVIRKDLLDQAMSKKEESEGLMKPLRCTEKMVIRREARPMKEIVAPIP
LKQQNQFALLGSDVDSDDEVSTKNVPTTSATGTSPPKDWWNDDQDSGWQRVQQKEIIVEV
ERDMTEEEIEAAKILNEGPTWEDQDDEESANATSSETIQLEKEPVQPIE
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggccgacactataggaacatcatctaatattacaactacatcgtcttcctctcgacct
cgatcaaacagaggtcgtggaggacgttcccgtcaagctccacgccaagacggagaaaat
tccgctgaaaatcaagatgcggcaccttcgatgaacccgcgaggaggacatcaaggtttt
aacaaaaacagacggaccagagttcaaaaagatggaccgtctggaaatcgtgctgaaaca
caaataagccatactttcaatccaaacgctgcaactttcaacccatcacaatctaataca
tttaatcctaatattccaccgccgttgttaccatcgaattcggttgacgtacctccgaat
cagaatataaggcaacaaaatcaaaattcaagacgtcgtgatggacaacaaaataacaac
ccgaactctagacgtcgtgatggacaacaaaatgatcaacgtcgacaaactggaaaccaa
gaaccgcgagagcagcaacagaaccccatgagacaacaaaataggaaccaacagaacccg
cagcaaaacaaaaatgtgaatgcgggcccatcaggacaacatcaagagaatagaagaaat
caaggtggtttcaaaagaagtcaaggagcccgacgacgtgaacaaagagaagaacctctg
acagaagaagaaacaaaaatgctggctgataaacctctgcgagaacgtctagtttatctt
ctggaaaataacaaatacgaatgtgctatttgttacacaagaattaccacccgacaagga
gtttggtcttgcaaaacctgctatcatatctttcatatttcaaccggatgtatcacagac
tgggctaaatccagtagagacaaggaaggagccaacacatggagatgccctacatgccaa
actgaaaatgaaacgatgccttacaactaccactgcttttgtggacgtatgagaaaccca
aactttcgcgttggtgaaattccacatagttgtggagagatttgcggaggagctagaaag
tatggttgtcctcatccatgtaatgaactttgtcacccgggtccatgtgtcgaatgcaag
ctacatgtaacgaaatcatgtaattgtggaaaaacgaagaaaagcgtaaggtgcggatcg
ggccagaatgttatgtgcgatattgtttgtgggaagtctctttcatgcggacagcacaca
tgcgaaaagatttgccactccggtgagtgtggagattgcacagtatttctggaacaagat
tgcttctgtggaaagttaccaaaagaagtactgtgcaatccagcagctggtgaaaaatat
tcgtgtgggtctgaatgcgatggtatgttcgtttgtggagtacatcgttgcacaaaaaaa
tgccacgataaggagtgtggagaatgcgagactggagtacataaaatccgaacatgtccg
tgtggccgaaacactcttcagtcgcttggaattattagaacaaagtgcactgatgcagtt
ccaacttgcaattcgatatgtgacaaatggctaacctgtggaacaccagggaagaatcac
aaatgccgagaaaaatgccacgacgggccatgcccaccgtgtagtttaaatacttctgtg
atctgtcgttgtggaacttccaagggagttatcccatgtgatgagtatttggaaattatg
aaaactactggagaatatctttgcacaaaaaggtgtcgaaagaagaagtcttgtggtatg
cacaaatgccaagaagtttgttgcattcaggatgaacactactgtcttcaaatgtgcaat
aaacgtctgtcatgtggaatacacacgtgtgagaatgtgtgtcatgctggccaatgccgt
ccttgtcttcaagcaagtttcgatgagcaattttgtcattgtggaacgactgttcgaatg
cctccaattccatgtggtgctcgactcccagtttgttctcaaccatgtgctcgtccacac
atttgtgatcatccggtgacccacaaatgccacggtgaacaaaactgcccaccatgcaca
catctaacagataagacatgttatggtggacatacagttcgcaaaaacataccatgccat
atcgaatctgtctcatgtggaatcgtttgtcaaaagcctctaaaatgtggcgttcacatt
tgtcaaagaagctgtcatggagacgaatgcgagaaagaaggagagaagtgcacgaagaaa
tgtgaaacgattcgagaattatgcgaacatccatgtgctttaccatgtcacgaatcttct
ccctgtgaaccgagctgttgcaaagctaatgttcgagtgacatgcgaatgtggaagaatc
aaaaaagaagcgccatgttgtgaagtggataaaatgatacaaacgaaaatagagaaggaa
gagagtgataaggcggactccggagatgaagacaaaccaggaaagctcaaaagatcatca
agtttctcacaactgaactgcatgaaatgtgatgatgagtgtaagaagttagagagaaac
cgaaaagtagcagaagccctagaagtagatacagatgaatatggaatgaacaagctggct
cccacgatttcctttccctgctatctcaaagagatggttcgtacgaacctcgagttcgtt
aaaaatgttgagaaggttttcattgatctagttataaaaattcttagcggagaggcatat
catgatgttttccgatcacacctcccccctatgagtattgaaaagcgtcgttttgttcac
gagtatgcgaacttcttcaatatcacatctgagagcgtcgacagtccgcccaagcggagc
atcgttttgactgcagttcgtggaaagtcgcatcaacctcttattttgatcagtgatctc
gtaaacttcaaaggagctttaaaaactccaggaccagcggttattcgaaaagatttgtta
gatcaagctatgagtaaaaaggaagagtcagaagggcttatgaagccgttgagatgcact
gaaaaaatggtaatcagacgagaagctcgcccgatgaaggaaatcgttgctccgatacct
ctgaaacagcaaaaccaattcgcactgcttggaagcgatgttgattccgatgacgaggta
tccacaaaaaatgtccccacaacaagtgccactggtacttcccctccaaaagactggtgg
aacgatgatcaagactctggttggcagagagttcaacaaaaagaaattattgtcgaagta
gaacgagacatgactgaagaagagattgaagcagcaaagatcctcaatgaaggtccaact
tgggaagatcaagacgatgaagaatctgctaatgcaaccagtagcgaaactattcaactt
gaaaaagaaccagttcaacctatcgaataa
DBGET
integrated database retrieval system