KEGG   Caenorhabditis remanei (nematode): GCK72_010728
Entry
GCK72_010728      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K12236  transcriptional repressor NF-X1
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:crq03000]
    GCK72_010728
   04121 Ubiquitin system [BR:crq04121]
    GCK72_010728
Transcription factors [BR:crq03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    GCK72_010728
Ubiquitin system [BR:crq04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   NFX1 proteins
    GCK72_010728
SSDB
Motif
Pfam: zf-NF-X1 R3H
Other DBs
NCBI-GeneID: 9811432
NCBI-ProteinID: XP_003111731
UniProt: E3LWW8
LinkDB
Position
III:complement(11130163..11133787)
AA seq 1129 aa
MADTIGTSSNITTTSSSSRPRSNRGRGGRSRQAPRQDGENSAENQDAAPSMNPRGGHQGF
NKNRRTRVQKDGPSGNRAETQISHTFNPNAATFNPSQSNTFNPNIPPPLLPSNSVDVPPN
QNIRQQNQNSRRRDGQQNNNPNSRRRDGQQNDQRRQTGNQEPREQQQNPMRQQNRNQQNP
QQNKNVNAGPSGQHQENRRNQGGFKRSQGARRREQREEPLTEEETKMLADKPLRERLVYL
LENNKYECAICYTRITTRQGVWSCKTCYHIFHISTGCITDWAKSSRDKEGANTWRCPTCQ
TENETMPYNYHCFCGRMRNPNFRVGEIPHSCGEICGGARKYGCPHPCNELCHPGPCVECK
LHVTKSCNCGKTKKSVRCGSGQNVMCDIVCGKSLSCGQHTCEKICHSGECGDCTVFLEQD
CFCGKLPKEVLCNPAAGEKYSCGSECDGMFVCGVHRCTKKCHDKECGECETGVHKIRTCP
CGRNTLQSLGIIRTKCTDAVPTCNSICDKWLTCGTPGKNHKCREKCHDGPCPPCSLNTSV
ICRCGTSKGVIPCDEYLEIMKTTGEYLCTKRCRKKKSCGMHKCQEVCCIQDEHYCLQMCN
KRLSCGIHTCENVCHAGQCRPCLQASFDEQFCHCGTTVRMPPIPCGARLPVCSQPCARPH
ICDHPVTHKCHGEQNCPPCTHLTDKTCYGGHTVRKNIPCHIESVSCGIVCQKPLKCGVHI
CQRSCHGDECEKEGEKCTKKCETIRELCEHPCALPCHESSPCEPSCCKANVRVTCECGRI
KKEAPCCEVDKMIQTKIEKEESDKADSGDEDKPGKLKRSSSFSQLNCMKCDDECKKLERN
RKVAEALEVDTDEYGMNKLAPTISFPCYLKEMVRTNLEFVKNVEKVFIDLVIKILSGEAY
HDVFRSHLPPMSIEKRRFVHEYANFFNITSESVDSPPKRSIVLTAVRGKSHQPLILISDL
VNFKGALKTPGPAVIRKDLLDQAMSKKEESEGLMKPLRCTEKMVIRREARPMKEIVAPIP
LKQQNQFALLGSDVDSDDEVSTKNVPTTSATGTSPPKDWWNDDQDSGWQRVQQKEIIVEV
ERDMTEEEIEAAKILNEGPTWEDQDDEESANATSSETIQLEKEPVQPIE
NT seq 3390 nt   +upstreamnt  +downstreamnt
atggccgacactataggaacatcatctaatattacaactacatcgtcttcctctcgacct
cgatcaaacagaggtcgtggaggacgttcccgtcaagctccacgccaagacggagaaaat
tccgctgaaaatcaagatgcggcaccttcgatgaacccgcgaggaggacatcaaggtttt
aacaaaaacagacggaccagagttcaaaaagatggaccgtctggaaatcgtgctgaaaca
caaataagccatactttcaatccaaacgctgcaactttcaacccatcacaatctaataca
tttaatcctaatattccaccgccgttgttaccatcgaattcggttgacgtacctccgaat
cagaatataaggcaacaaaatcaaaattcaagacgtcgtgatggacaacaaaataacaac
ccgaactctagacgtcgtgatggacaacaaaatgatcaacgtcgacaaactggaaaccaa
gaaccgcgagagcagcaacagaaccccatgagacaacaaaataggaaccaacagaacccg
cagcaaaacaaaaatgtgaatgcgggcccatcaggacaacatcaagagaatagaagaaat
caaggtggtttcaaaagaagtcaaggagcccgacgacgtgaacaaagagaagaacctctg
acagaagaagaaacaaaaatgctggctgataaacctctgcgagaacgtctagtttatctt
ctggaaaataacaaatacgaatgtgctatttgttacacaagaattaccacccgacaagga
gtttggtcttgcaaaacctgctatcatatctttcatatttcaaccggatgtatcacagac
tgggctaaatccagtagagacaaggaaggagccaacacatggagatgccctacatgccaa
actgaaaatgaaacgatgccttacaactaccactgcttttgtggacgtatgagaaaccca
aactttcgcgttggtgaaattccacatagttgtggagagatttgcggaggagctagaaag
tatggttgtcctcatccatgtaatgaactttgtcacccgggtccatgtgtcgaatgcaag
ctacatgtaacgaaatcatgtaattgtggaaaaacgaagaaaagcgtaaggtgcggatcg
ggccagaatgttatgtgcgatattgtttgtgggaagtctctttcatgcggacagcacaca
tgcgaaaagatttgccactccggtgagtgtggagattgcacagtatttctggaacaagat
tgcttctgtggaaagttaccaaaagaagtactgtgcaatccagcagctggtgaaaaatat
tcgtgtgggtctgaatgcgatggtatgttcgtttgtggagtacatcgttgcacaaaaaaa
tgccacgataaggagtgtggagaatgcgagactggagtacataaaatccgaacatgtccg
tgtggccgaaacactcttcagtcgcttggaattattagaacaaagtgcactgatgcagtt
ccaacttgcaattcgatatgtgacaaatggctaacctgtggaacaccagggaagaatcac
aaatgccgagaaaaatgccacgacgggccatgcccaccgtgtagtttaaatacttctgtg
atctgtcgttgtggaacttccaagggagttatcccatgtgatgagtatttggaaattatg
aaaactactggagaatatctttgcacaaaaaggtgtcgaaagaagaagtcttgtggtatg
cacaaatgccaagaagtttgttgcattcaggatgaacactactgtcttcaaatgtgcaat
aaacgtctgtcatgtggaatacacacgtgtgagaatgtgtgtcatgctggccaatgccgt
ccttgtcttcaagcaagtttcgatgagcaattttgtcattgtggaacgactgttcgaatg
cctccaattccatgtggtgctcgactcccagtttgttctcaaccatgtgctcgtccacac
atttgtgatcatccggtgacccacaaatgccacggtgaacaaaactgcccaccatgcaca
catctaacagataagacatgttatggtggacatacagttcgcaaaaacataccatgccat
atcgaatctgtctcatgtggaatcgtttgtcaaaagcctctaaaatgtggcgttcacatt
tgtcaaagaagctgtcatggagacgaatgcgagaaagaaggagagaagtgcacgaagaaa
tgtgaaacgattcgagaattatgcgaacatccatgtgctttaccatgtcacgaatcttct
ccctgtgaaccgagctgttgcaaagctaatgttcgagtgacatgcgaatgtggaagaatc
aaaaaagaagcgccatgttgtgaagtggataaaatgatacaaacgaaaatagagaaggaa
gagagtgataaggcggactccggagatgaagacaaaccaggaaagctcaaaagatcatca
agtttctcacaactgaactgcatgaaatgtgatgatgagtgtaagaagttagagagaaac
cgaaaagtagcagaagccctagaagtagatacagatgaatatggaatgaacaagctggct
cccacgatttcctttccctgctatctcaaagagatggttcgtacgaacctcgagttcgtt
aaaaatgttgagaaggttttcattgatctagttataaaaattcttagcggagaggcatat
catgatgttttccgatcacacctcccccctatgagtattgaaaagcgtcgttttgttcac
gagtatgcgaacttcttcaatatcacatctgagagcgtcgacagtccgcccaagcggagc
atcgttttgactgcagttcgtggaaagtcgcatcaacctcttattttgatcagtgatctc
gtaaacttcaaaggagctttaaaaactccaggaccagcggttattcgaaaagatttgtta
gatcaagctatgagtaaaaaggaagagtcagaagggcttatgaagccgttgagatgcact
gaaaaaatggtaatcagacgagaagctcgcccgatgaaggaaatcgttgctccgatacct
ctgaaacagcaaaaccaattcgcactgcttggaagcgatgttgattccgatgacgaggta
tccacaaaaaatgtccccacaacaagtgccactggtacttcccctccaaaagactggtgg
aacgatgatcaagactctggttggcagagagttcaacaaaaagaaattattgtcgaagta
gaacgagacatgactgaagaagagattgaagcagcaaagatcctcaatgaaggtccaact
tgggaagatcaagacgatgaagaatctgctaatgcaaccagtagcgaaactattcaactt
gaaaaagaaccagttcaacctatcgaataa

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