Chitinophaga sancti: SIO70_21960
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Entry
SIO70_21960 CDS
T09582
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
Organism
csac
Chitinophaga sancti
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
Motif
Other DBs
NCBI-ProteinID:
WPQ61026
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Position
5413440..5416211
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AA seq
923 aa
AA seq
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MRYRTLLYMLAFSGKVLAQSVPDSIPTASVSKVSGEELYKTPAANITNTFYGRLPGIITE
QASGEPGYDNASFVIRGMGTYDNNDLAIFVDGFQVNNTYFQYLSAIEIAEVKLYKDAAAL
AAFGMRGANGVLWITTKRGHAGKPTVQVQVRNGVQQAENINKPLRSYDYARLYNQAVSND
LYAVNNHQYIYTPKYTTTQLEAYKNGTGTDIDWFDEVLKKNAVFRDANITFSGGDTTTRY
ALIVDYMKNQGLYNVETNSTTSNAQIQRFNLRANLDFSFFKIFEARVDLGGRIEDRRYPN
FNGPSLWNNMAVYPSNVYPVKDETGNWSGTTVYSNNPVASLKALGWTSTHDRTLQANFNL
KEKLDFITPGLYLNEAVSFNTWTRSAASKTATYARYYNGVQTTTDVTSDLVASASSPTNQ
YDWKQANLSAGYDRTFGSHAVHALVNYFASNYIEDWNGNFNGSGYNTGNNIFHHYTNLGG
TINYTYREKYMLGFGFGYSGSDNYAIGQNHGFYPAISAGWIALTAPRYLKVRASAGKSGN
ENSAQGRYLYQQYYGTSTAFYTGVTSLNSNTAIAPTYIANPDIFAEHSMKYNVGFDMTLI
KKLDIIADAYMDKRGGIITYDQASYAATIGTALMYKNIGKMTNKGFELTMNYHDTWKGLG
YHVGGSMLYHKNTVDYKAEIAPVNSFSKTTGLSVNTPTGLISEGFYQTDDFNADGTLKSG
QPVPVFGAVQPGDLKYKDLDNSGFVDQNDVTKIGHPAYPSLYYSFNASLDYKGFDVAILF
QGGAGADFNLLNAATQTLAFVSNNNAFPMAKGAWAYYPSEGIDTRNTATYPRLTTQSNTN
NYRNSTFWIKKNNYLRIRNIEVGYSLPEAFLKRAHLSRLRLFMSATNPVTISKLLRDYNF
DPETPTGYPGLKSYIGGLSVSFN
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacagaacgctactatatatgctggccttttccggtaaagtgctggcgcaatcc
gttccggattcgatacctacggcttccgtgtcaaaggtatccggggaggaattatacaag
acaccggctgcaaatatcaccaataccttctatggccgtctgccaggtatcattaccgaa
caggccagcggcgagccgggctatgacaatgccagctttgtaattcgcggcatgggcact
tacgataataatgacctcgccatatttgtagatggatttcaggtgaacaatacctacttc
cagtatttatctgccatagaaattgcggaagttaaattatataaagacgccgctgcactt
gctgcctttggtatgcgtggcgcaaacggcgtactatggatcactacaaaaagaggccat
gcaggcaaacccaccgtacaggtgcaggtgaggaatggcgtacaacaggcggaaaatatc
aataaaccattgcggtcttatgactatgcacggctctataatcaggcagtgagcaatgac
ctgtacgcagtaaacaaccatcaatatatttacacgccaaagtataccaccacacaactg
gaggcgtataaaaatggtactggtacagatatagactggtttgatgaggttctgaaaaag
aacgccgtattcagagatgcaaatattactttcagtggcggtgacacgactacccggtat
gcactcatcgtagattacatgaagaaccagggtttgtataatgtggaaacaaattccact
acttcaaatgcacagatccagcgctttaacctgcgggccaacctggattttagcttcttc
aaaatattcgaagccagggtagacctgggtggccgtattgaagacaggcgatatccgaac
ttcaacggtccgagcttatggaataatatggcagtatacccttccaatgtgtacccggtg
aaagatgaaacgggcaactggtcaggtacgaccgtttattcaaataaccctgtggcatcg
ctgaaagcactgggttggacatcgacacatgacagaacattacaggcgaattttaacctg
aaagaaaaactggatttcattactcccgggttatacctgaatgaagcagtgagtttcaat
acatggaccagaagcgctgccagcaaaacagctacttatgcacgttattataatggcgtg
caaacgacaacagatgttacttcagatcttgtagccagtgccagttcaccgactaaccag
tacgactggaaacaagcgaacctgagtgcagggtatgaccgtacttttggttcccatgct
gtacatgcactggtgaattactttgccagcaactatatagaagactggaatggcaatttc
aatggttcaggatataatacaggcaataatatcttccatcactatacgaacttaggcggc
accattaactatacataccgtgaaaagtatatgttgggctttggttttggatatagcggt
tcagacaactatgctatagggcagaaccatggtttctatccggccatctctgcgggatgg
atcgcactgacagcgcctcgttacctgaaagtgagagcttctgctggcaaatcaggaaat
gaaaattctgcccagggcaggtatctttaccagcagtattatggcacctccaccgcattc
tatacgggggtgaccagtttgaattctaacacagccatcgcacctacctatatagccaac
cctgatatctttgcagagcacagcatgaagtataatgtcggctttgatatgaccctgatt
aagaaactggatattatagcagatgcatacatggataaacgtgggggtataatcacctac
gatcaggccagttatgccgctactattggcacggcactgatgtataagaacatcgggaag
atgacgaataaaggatttgaactcacgatgaactaccatgatacatggaaagggttgggt
taccatgtagggggcagcatgctgtatcataagaacacagtagactataaagctgaaatt
gcgcctgtgaatagttttagcaaaacgacagggttatctgtcaatacgcccacggggtta
atatcagaagggttttaccagacagacgatttcaatgcagatggtacattaaagtcagga
caaccagtaccagtttttggtgcagtacagcccggagatctgaaatacaaagacctagac
aatagcggattcgtggatcagaatgacgtgactaaaatcgggcatccggcctatccatct
ctgtattattcttttaatgcatcactggattacaaaggttttgatgtggcgatcctattt
cagggaggtgctggtgctgatttcaatctgctaaatgcagccacgcagaccctggcattc
gtaagtaataacaatgccttcccaatggccaaaggtgcctgggcctattatccgtcagaa
ggtattgacacaaggaacacggctacctatccaaggctcacgacccagtcaaataccaat
aattaccggaattcaactttctggataaagaaaaacaattacctgcgcatcaggaatata
gaagtaggctattctttgcctgaggcattcctgaaaagagcacacctgagccgtttgcgc
ctgtttatgagtgcgacgaatcctgtcaccatcagcaagctcttaagggattacaacttt
gatccggagaccccaacaggataccctggactgaagtcgtacatcggtggactcagtgtt
tcatttaactaa
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