Camelina sativa (false flax): 104718870
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Entry
104718870 CDS
T05044
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104718870
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104718870
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104718870
03036 Chromosome and associated proteins [BR:
csat03036
]
104718870
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104718870
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104718870
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104718870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
104718870
NCBI-ProteinID:
XP_010434994
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All DBs
Position
10:complement(13913139..13915758)
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AA seq
514 aa
AA seq
DB search
MIKQIFGKLPRKPSKSSHNDSNPNGDGGGVNSYYIHNSGTSISKSNGANGTVAPPPPSST
SNRTNQANGVYDALPSFRDVPSLEKPNLFIKKLSMCCVVFDFSDPSKNLREKEIKRQTLL
ELVDYIATVSTKLSDAAMQEIAKVAVVNLFRTFPSANHESKIFETLDVDDEEPALEPAWP
HLQVVYELLLRFVASPMTDAKLAKRYIDHSFVLKLLDLFDSEDQREREYLKTILHRIYGK
FMVHRPFIRKAINNIFYRFIFETEKHHGIAELLEILGSIINGFALPLKEEHKLFLVRALI
PLHRPKCAAAYHQQLSYCIVQFVEKDFKLADTVIRGLLKYWPVTNSSKEVMFLGELEEVL
EATQAAEFQRCMVPLFRQIARCLNSSHFQVAERALFLWNNDHVRNLITQNIKVIMPIVFP
AMERNTRGHWHQAVQSLTLNVRKVLAETDQVLFDECLAKFQEDEANETKVVAKREATWKL
LEDLAASKSVSNEAVLVPRFSSSVTLTTGKTSGS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcagatatttgggaaactccccaggaagccatcgaagtcatctcataatgac
tctaatccaaacggagatggtggtggtgttaattcatattacatccataattcgggtact
agtatctccaaatccaatggagctaatggcactgttgctcctcctcctccttcctcaacg
agtaacagaaccaatcaagccaatggggtttatgacgctttgcctagctttagagacgtt
cctagcttggagaaacctaatctctttatcaagaaactgagtatgtgttgcgttgtcttc
gacttcagtgacccctccaagaatctgagagagaaagagattaagagacagactttgctt
gagcttgttgattatatagcaacggtttccacaaagttgagtgacgctgcgatgcaggag
attgctaaagtggctgttgttaatctcttcaggacgtttccttccgcgaatcacgagagc
aaaatctttgaaacgcttgatgttgatgatgaggagcctgcgttggaaccggcttggcct
catcttcaagttgtctatgagcttctccttagattcgtggcttctcccatgactgatgct
aagcttgcaaagagatatatcgaccattcctttgtcttgaagctattggatttgtttgac
tctgaagaccaaagggagagggagtatctaaagaccattctccatcggatatacgggaag
ttcatggtgcacagaccttttatcagaaaggccatcaacaatatcttctacaggttcata
ttcgaaaccgagaaacatcatggcatagcagagttgcttgagattcttggaagtataatt
aatggtttcgcattgccgttaaaagaagagcataagcttttccttgtccgggccttgatt
ccactacacagacctaaatgtgcagctgcttatcatcaacagctttcttattgcattgtt
cagtttgtagagaaagacttcaagcttgctgataccgtcattagaggacttttaaagtat
tggcctgtgactaacagttcaaaggaagttatgtttcttggggagttggaagaggttttg
gaagcaactcaagcagctgagtttcagcgatgtatggttcctttgttccgtcaaatcgcc
agatgcctcaacagttctcattttcaggtggctgaaagggctctgtttctgtggaacaac
gatcacgtaagaaacctgattactcaaaacattaaagtgataatgccaattgtgttcccg
gctatggagagaaacacacggggacattggcaccaagcagttcagagtctgactttaaat
gtgagaaaggtactggcagagacagaccaagtcctgtttgatgaatgcttagccaagttc
caagaagatgaagcaaatgaaaccaaggtcgtagccaaacgagaagcaacatggaagctt
ttggaagacttggcagcttccaaatccgtaagcaacgaggcagtactcgtcccaagattt
tcatcttcggttactctcacaaccggtaaaacttcgggtagttga
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