Camelina sativa (false flax): 104720125
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Entry
104720125 CDS
T05044
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104720125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104720125
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
104720125
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104720125
Multi subunit Ring-finger type E3
ERAD complex
104720125
LMBR1L-GP78-UBAC2 complex
104720125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
CUE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-C3HC4_2
zf-RING_11
zf-C3HC4_4
Endonuclease_7
zf-RING_16
E3_UbLigase_EDD
zf-HC5HC2H
RINGv
PHD
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
104720125
NCBI-ProteinID:
XP_010436389
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All DBs
Position
10:complement(7435058..7440514)
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AA seq
543 aa
AA seq
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MGIRYLPVSVASTALSFIGLQVWTELSLDRLRSDGLIANNISLGDPEHALDLLLGSYFTI
ALLANFVLNVYILLVLSLKTLFFGDLYDVETKKLVERLANYIIYKGTFLPLVIPPTIFQG
VLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTYFRVYSVLFVVLSVDMLWIKLSL
MTYNTIGSSVYLLLLFEPCSIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSKFLDSM
TAGSLLEWKGLLNRNLGFFLDMATLIMALGHYLHIWWLHGIAFHLVDAVLFLNIRALLSA
ILKRIKGYIKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHLFHLGC
LRSWLDQGLNEVYSCPTCRKPLFVGRTESEVNPRTEEVSSDEQLARQLERQNNPVHALAT
GLFPTEMPNSVENDTSRFSSFFILAFLINNTKVTICLELNDSCSVTPLILVLLSPGMHSC
GHFWTGGLHLRTVSSTTNESLANILAMAETVREVMPHMPDEIIFQDLQRTNSVAVTVNNL
LQM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggggataaggtacttgccggtctcggtagcatcaacagctttgagctttattggcctt
caagtctggacagagttgtctctcgatagacttagatcagatgggctcattgccaacaac
atctctttaggagaccccgagcatgcccttgacctgcttctgggctcttatttcactatt
gccctgctggcaaattttgtgctcaatgtgtatattcttctggtactttctctcaagact
ctattttttggagatttgtatgacgttgaaactaaaaagttagtggagcgacttgccaat
tatatcatttacaagggtacatttctaccactggttattcccccgaccatatttcagggt
gtactgtggacagtttggttgactgttctatgtactttaaagatgtttcaagctttggct
agagaccggcttgaacgattgaatgcatctccttcttctacaccttggacatactttcgt
gtgtattcagtgctgttcgtggtcctctctgttgatatgttgtggataaaactttccctt
atgacatacaatacaattggttcctctgtgtatctgctgttactttttgagccatgcagt
atagcttttgagaccttgcaggcgctgttaattcatgggtttcagctactagatatgtgg
attaaccacttagcagtcaagaactccgactgccaaagatctaaatttctcgattccatg
acagcaggctcactcttggaatggaagggcctcctcaaccgtaaccttggtttcttcctg
gacatggctactttaataatggcactaggtcattatttgcacatttggtggctgcatggc
attgcttttcatctggtggacgcagttttgtttctcaacatacgtgcattgttaagtgca
attttgaaacgaataaaaggatacattaaactaagaatagctctgggtgctctccatgca
gcccttcctgatgcaacttctgaagagttaagggcatatgatgatgaatgtgccatatgt
cgggaacctatggctaaggccaaaagacttcactgcaaccaccttttccatcttggatgc
ttgcgatcctggttggatcaaggtctaaatgaggtttattcctgtcctacatgtcgtaag
cctctttttgttggtcgaactgaaagtgaggtgaaccctcgcacagaggaagtctcaagc
gatgaacagttagcccgtcagcttgaaagacaaaataatcccgtgcatgcactagccact
ggattatttcctaccgagatgccaaattctgtcgaaaatgatacttcgaggttcagttca
ttcttcattcttgcttttcttatcaacaacaccaaagtaacaatttgtttagaacttaat
gattcttgttcagtgactcccttgatcttggtgctgttaagcccgggaatgcattcctgt
ggacatttttggacaggtggtctgcatctgagaactgtatcaagcacgacaaatgaaagc
ttggcaaatatactagctatggctgagacagtgagggaagtcatgccacacatgcccgat
gaaattattttccaggacctgcagagaacaaactctgttgctgttacagtgaacaatctt
ctccagatgtga
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