Camelina sativa (false flax): 104722989
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Entry
104722989 CDS
T05044
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104722989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104722989
03041 Spliceosome [BR:
csat03041
]
104722989
03032 DNA replication proteins [BR:
csat03032
]
104722989
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
104722989
Spliceosome [BR:
csat03041
]
Complex A
U1 snRNP components
Sm proteins
104722989
U2 snRNP components
104722989
Complex B
U1 snRNP components
104722989
U4/U6.U5 tri-snRNP components
104722989
Complex C
U2 snRNP components
104722989
DNA replication proteins [BR:
csat03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
104722989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104722989
NCBI-ProteinID:
XP_010439573
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All DBs
Position
11:12027914..12029144
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AA seq
261 aa
AA seq
DB search
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKIN
EEREDRRTLGLVLLRGEEVISMTVEGPPPPDESRAKAGSAAAVAGPGIGRAAGRGVPTGP
LVQAQPGLSGPVRGVGGPSPGMMQPQISRPPQLSAPPIIRPPGQMLPPPPAFGGQGPPMG
RGPPPPYGMRPPPQQFSGPPPPQYGQRPMVPPGGMMRGPPPPPPHGMQGMPPQRPGMVPP
PGGFAPPRPGMPPPPHNQQQQ
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagttcgaagatgcttcagttcatcaactacaggatgcgagtgacg
atccaagacgggagacagctcgtcgggaagttcatggcgttcgaccgtcacatgaacctc
gttctcggcgactgcgaggagtttcgtaagcttccgccagctaaagggaagaagatcaac
gaagagcgagaagatcgccgtacgcttggtttggtgttgcttagaggtgaagaagtaatc
tcgatgactgttgaaggaccgcctcctcctgacgaatctcgtgctaaagctggctctgca
gctgctgttgctggtccaggtatcggtcgtgctgctggacgtggtgtaccaaccggtccg
ttagttcaagctcagcctggactatctggtccggttcgtggtgttggtggaccatctcct
gggatgatgcagcctcagatctctcgtccgcctcagctctcggctcctccgattattcga
cctccgggacagatgttgccgccgcctcctgcttttggtggtcaaggtcctcctatggga
agaggtcctcctccgccttacggtatgaggccgcctcctcagcagttttctggaccaccg
ccgcctcagtatgggcaaaggccaatggttcctcctggtggtatgatgagaggacctcct
cctcctccacctcatgggatgcaaggaatgcctccgcaacgccctggaatggttcctcct
cctggtgggtttgctccaccgcgtcctggcatgccaccaccgccacataatcagcagcag
cagtga
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