Camelina sativa (false flax): 104726164
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Entry
104726164 CDS
T05044
Name
(RefSeq) E3 ubiquitin protein ligase RIN3-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104726164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104726164
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
104726164
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104726164
Multi subunit Ring-finger type E3
ERAD complex
104726164
LMBR1L-GP78-UBAC2 complex
104726164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUE
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-C3HC4_2
zf-RING_11
zf-C3HC4_4
Endonuclease_7
zf-RING_16
zf-RING_5
E3_UbLigase_EDD
zf-HC5HC2H
RINGv
PHD
FANCL_C
Motif
Other DBs
NCBI-GeneID:
104726164
NCBI-ProteinID:
XP_010443260
LinkDB
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Position
2:15917693..15922511
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AA seq
578 aa
AA seq
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MGIRYLHISVATTALSFVGLQVWSELSLDRHRADGLITKNVSLGDSEDPLELLLGSHTTI
ALLTSFVLNVYILLVLSLKTLFFGDLYAIETKKLVERLANYIIYKGTFLPLMVPPTVFQG
VLWTIWLTVLCTLKMFQALARDRLERLNASPSSTPWIYFRVYSALFIVLSAVLFWINLSL
MIYNRIGSSLYLLLLFEPCSVAFETLQALLIHGFQLLDMWINHLAVKNSDCHRSKFLDSM
TAGSLLEWKGLLNRNLGFFLDMATLVMALGHYFYIWWLHGMAFHMVDAVLFLNIRALLSA
ILKRIKGYIKLRVALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHLFHLGC
LRSWLDQGLNEVYSCPTCRKPLFVGRTENEANPSREEVLRDEQLARQFERQNSSVHARIT
GMFPTETPNSTESDPWRNSGLDSSLLQTWSDQGVDVAGPSAGSRSVGLGQVQMMMRHLAS
VADGYAQNALDDATWGLWPMNPSQVSNPSTNVPPAGGGRTGGLHLRTVSRAENSMASILA
MVETVREVLPHVPDEIIFQDLQRTNSAAVTVNNLLQMS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggggataagatatctgcacatttctgtggcaacaacagctttgagctttgtgggttta
caagtctggagtgagttgtctcttgatagacatagagctgatggtttgattaccaagaac
gtctctttaggagattctgaggatccccttgagttgcttctgggttctcacactacaatt
gccttgctgacaagttttgtgctcaatgtctacattcttcttgttctttctctcaagact
ctgtttttcggggatctatatgccattgaaactaaaaagctggtggaaagacttgccaat
tacatcatttacaagggcacttttctgccgttgatggttccaccaacagtatttcagggg
gtcctatggacaatctggttgactgttctatgtactcttaagatgtttcaagctttggct
agagatcggcttgagcgattgaatgcatctccttcttctactccttggatatactttcgt
gtgtattcagctctgttcatagttctctctgctgttttgttctggataaacctttccctt
atgatatacaacagaattggttcatctctgtatttgttgttactttttgagccatgcagt
gtagcttttgagaccttgcaggcattgttgattcacgggtttcaactccttgatatgtgg
atcaaccacttagcagtcaagaattcagattgccacagatcaaagtttcttgattctatg
acagcaggctcattattggaatggaaaggcctacttaaccggaatcttggtttctttcta
gacatggctaccttggtaatggcccttggtcattatttttacatctggtggctccatgga
atggcctttcatatggtggatgcagttttgtttctcaacatacgtgccctgttaagtgca
attttgaaacggataaaaggatacattaaactgcgagtagctttaggtgcccttcatgca
gctcttcctgatgcaacttcagaagagctgcgggcatatgatgacgaatgtgctatatgt
cgggaaccaatggctaaggctaaaagacttcactgcaaccacctttttcatcttggatgc
ctgcgatcatggttggatcaaggtctaaatgaggtttactcttgtcctacatgtcgtaag
ccactttttgttggtagaactgagaatgaggcgaatcctagcagagaagaagtcttaaga
gatgaacagttagcccgtcaatttgagagacaaaacagttctgtccatgcacgaatcact
ggaatgtttccaaccgagacgccaaattccactgaaagtgatccttggaggaattcagga
ctagactcaagcttgctacaaacatggtcagatcagggtgttgatgtcgcgggtccctct
gcaggctccagatccgttggactggggcaggttcaaatgatgatgagacaccttgcatct
gttgcggatggttatgctcagaatgcacttgacgatgctacttggggtctctggccgatg
aatccttcgcaagtatcgaatccgtctacaaatgttcctcctgctggtggtggaagaaca
ggtggtctgcatctgagaactgtctctcgtgcagaaaatagcatggcgagtatactagct
atggttgagacagtgagagaagtcctgccacatgtgcctgatgaaataatttttcaggac
ctgcaaagaacaaattccgctgctgtcacagtgaacaatcttctccagatgtcatga
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