Camelina sativa (false flax): 104731516
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Entry
104731516 CDS
T05044
Name
(RefSeq) calponin homology domain-containing protein DDB_G0272472-like
Organism
csat
Camelina sativa (false flax)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
TolA_bind_tri
zf-RING_2
Prok-RING_4
DUF2935
Motif
Other DBs
NCBI-GeneID:
104731516
NCBI-ProteinID:
XP_010449216
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All DBs
Position
12:complement(12934110..12938742)
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AA seq
1147 aa
AA seq
DB search
MEMASSEVDLSSCRTFNCVLSRPHERCTRGGDNNNKNKNNNNNVRNIHVAAYEKNLNVFV
RDHFENCSVVSGDFDNDDSTKSSVSSDHRATKTEEPRHDVPSSSSSLGSETNLNSGQPEN
PSRKEKMAASSLVQIWEARTTQQPPSSNQTLIDSRTSSMGSNALENSDSINEESVKDSDL
LIQPIEEGNNEEEEEEEVQEIECVSQLVLPPPDSGEKDREKVRVMDIIRKLSNDSETITN
NENGSSSNDNSKEVQTTEARCFPQVTCSPRIRGRQAFADLLVLMMRDREKELASLLERHC
VSKFTHRGRIQSTLRIRCYERCKAIQDRHRCKPSSTGSDLNRSPRGSGVLHLLRGKYKTN
SENTDTAASSTTVSSRGRILDKDPHKATEKKVLQEKNEKIDIKEIQEVVSAVENAKKAVL
SEIAENKNGLKKAVGETIQKKATEGRDEKRETKEKAIAKESPELAKEKSVAKEIVEGKAL
GGIAEKVNIWNLEEKINRRKGMEKGKFEGKANTERVEKNDVLEEATRRIINVESAERSIS
TTTTTTKETMMPRCEFAEKVIRRKEKEDCVSMESKSKEIEDRNIKPQEVTTQEDNCLCKP
IEKESVEEGNTLMGIAEKVNMWNSKEKKHRRRVMEKGKGKTETNEVLQEASRRISNVETA
ERSIATSSQTVEKVVGNKEVIASVEAKSKEIVEDKNMNPQAVSHGSREKDKEKNYSQHGE
KTSTLRDLEAKSTKEIERNNSQEVTQEEESISKGSRERAKEKNSSQQDEKISVLQNPNVE
NGIQESEDEETKKVECKEKGESIQEAAVEFVSEWDETEMEEEDEYGDYDLYIGENMDDWI
HDISRPRSYWEDLRKERYLEVLNTESEKKDICNLIQRRTVSDFLTSDLRQKIDNLMITRV
QSHIRVPINQVKEEDEDEEEEEKEEWVDECSARNQENNETEEEPEKPYLEAASDVCSLSS
ARSSTMMSWTFRDQDIYKDHEPTTTLSLPESSAPTNQSETQTISEVRSQMEQLQREMLEL
RSSAPTNQSETQTISELRSQVEQLQREMLELRSSFKSCIDMQVHFQKFVTQDLSRSGSSV
EERVDSKKDPLKRKCCVCSEMPVDSLLYRCGHMCTCLKCAHELQWSSKKCPICMAPIVDV
VRAFLDS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggcgtcctctgaggtagacttgtcatcatgccgaacttttaattgcgtcttg
agtcgtcctcacgagagatgcacccgaggaggagacaacaacaacaagaacaagaacaat
aacaacaatgtcagaaacatacacgtcgctgcctacgagaagaatctcaatgtttttgtc
agagatcatttcgaaaactgtagcgtcgtctctggtgattttgataacgatgattccacc
aaatcctctgtttcttctgatcatcgggccacgaaaacagaggaacctcgtcacgatgtc
ccttcatcgtcttcgtctctaggatccgagactaatttgaattcgggtcaaccggagaac
ccgtcaagaaaagaaaaaatggcagcttcttctctcgttcagatatgggaagcgaggacg
acgcagcaaccaccaagctcgaaccaaaccctaatcgatagcagaacgagttctatggga
tcaaacgctttagagaattcggattctatcaacgaggaatccgtaaaagattctgactta
ttgattcagccgatcgaagaaggtaacaatgaggaggaagaagaagaagaagtacaagag
attgaatgtgtatcacaacttgtccttccacctccagattctggagagaaagatagagaa
aaggtcagagttatggatatcattcggaaactaagcaatgactcagaaacaataaccaat
aacgaaaatggtagcagcagcaacgacaatagtaaagaagtacagacaacggaagcgaga
tgttttcctcaggttacttgttctccaagaataagaggtcgtcaagctttcgctgattta
ttggtgctgatgatgcgtgatcgagaaaaggagttggcctctttactagaacgtcattgt
gtttcaaagttcacgcatcgcggacggattcagtcgacgcttagaatacgatgttacgaa
aggtgcaaggccattcaagatagacatcggtgtaaaccatcatcaacaggatctgattta
aaccgatcgcctcgaggttctggtgtactgcatcttctcagggggaaatataagacaaat
tctgagaatactgatactgcagcttcgtctactactgtgtcttctcgtggtcggattctg
gataaagatccgcataaggctacagagaagaaggttctgcaggaaaaaaatgagaagatt
gatataaaggagattcaagaagtggtttctgcagttgagaatgcgaagaaagctgtcttg
agtgaaattgcagaaaataagaatggtttaaagaaagctgtaggagaaactattcagaag
aaagctacagaagggagagatgaaaagcgagaaactaaggagaaagctattgccaaagag
agtcctgaattagcaaaggagaaatctgttgctaaggaaattgtagaagggaaggctttg
ggtggaatagctgagaaggtgaatatatggaacttagaggagaaaataaataggagaaaa
gggatggagaagggtaagtttgaaggaaaagctaatactgagagagttgagaaaaatgat
gtattggaagaagctacaagaaggatcattaatgtggaaagtgcggaaagaagcattagt
actactactactactacaaaggaaacaatgatgccgcggtgtgagtttgcagagaaggtg
ataagaagaaaggaaaaagaagattgtgtttctatggaatctaagtccaaagaaattgaa
gatagaaacattaaacctcaagaagttactacacaagaagataattgtttatgtaaacct
attgagaaggaaagtgtagaagaaggaaacactttgatggggatagctgagaaggtgaat
atgtggaactccaaggagaaaaagcataggagaagagttatggagaaaggtaaaggtaaa
accgagacaaatgaagtgttgcaagaagcttcaagaagaattagtaatgttgaaactgcg
gagagaagcattgctacttcaagtcaaacggtggagaaagttgttggtaacaaagaagtg
attgcttctgtagaagctaagtccaaagagattgttgaagataaaaatatgaatccacaa
gctgtgagtcatggctctagagagaaggataaagagaagaactattcacaacatggtgaa
aaaacttcgactctgcgagacttggaagctaagtcaactaaagaaatcgagagaaacaat
tctcaagaagttacacaagaagaagaatctattagtaaaggctctagagagagggctaaa
gagaagaattcttcacaacaggatgaaaaaatatcggttctccaaaatccaaacgtcgaa
aacggcattcaagaatcggaagatgaagaaaccaagaaggtagaatgcaaagaaaaggga
gaaagcatacaagaagcagcagtagagtttgtaagtgagtgggatgaaactgaaatggaa
gaagaagatgaatatggagattacgatctttacattggagagaatatggatgattggatt
cacgatatatcgaggcctcgaagttactgggaagatctaaggaaagaaaggtatcttgag
gttctcaacactgaatcagagaaaaaagatatttgcaatctcattcagagacgaacagtt
tcagactttttgacgagtgatttgcgacaaaagatcgataatctgatgatcactcgagtg
caaagtcacatacgtgtaccaatcaatcaagtaaaagaagaagacgaagatgaagaagaa
gaagaaaaagaagagtgggtagatgagtgttcagcaaggaaccaagaaaataatgaaaca
gaggaagaaccagagaagccatatcttgaagctgcaagcgacgtttgcagtctatcatca
gcaaggagtagtacaatgatgtcttggactttcagggatcaagacatttacaaggatcat
gaaccgaccacgactttgtctcttcctgaatcttcagcccccacaaatcaatctgaaacg
caaacgataagtgaagtcaggagtcaaatggagcaacttcaacgagaaatgcttgagcta
cgaagttcagcccccacaaatcaatctgaaacgcaaacgataagtgaactcaggagtcaa
gtggagcaacttcaacgagaaatgcttgagctacgaagttcatttaaatcttgcatcgat
atgcaagttcatttccagaaatttgtaactcaagatctttctcgttctggctcatcagta
gaagaacgagtagactcaaagaaagatcctttgaaacgcaagtgttgcgtttgctctgag
atgcctgttgactcgcttttgtataggtgtggacatatgtgtacgtgtctgaaatgtgct
catgaattgcaatggagcagtaagaaatgtccgatctgtatggctccaatcgtcgacgtt
gtgagagcttttcttgattcttag
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