Camelina sativa (false flax): 104731834
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Entry
104731834 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104731834
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104731834
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Motif
Other DBs
NCBI-GeneID:
104731834
NCBI-ProteinID:
XP_010449625
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Position
12:complement(15569475..15578534)
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AA seq
792 aa
AA seq
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MEDDGGERSSFVAGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLRFYDPT
VVIVPPNKLAADGMVGVSELVDRCYSTVRKVVLARGCFDDTKGAVLIQNLAAEEPLAPGL
DTYYKQHYLSLAAAAATIKWIEAEKGVIITNHSLTVTFNGSFDHMNIDATSVENLEIIDP
FHNALLGTSNKKRSLFQMLKTTKTVGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQVLRKFPKETDRVLCHFCFKPKKVTEAVLGFDNTRKSQNMISSIILLKTALDAL
PLLAKVLKDAKCFLLTNVYKSVCENDKYASIRKKIGEVIDDDVLHARVPFVARTQQCFAL
KAGIDGFLDIARRTFCDTSEAIHNLASKYREEFNLPNLKLPFNNRQGFFFRIPQKEVQGK
LPSKFTQVVKHGKNIHCSSLELASLNVRNKSAAGECFIRTETCLEALMDAIREDISALTL
LAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTESGPLAIDAGRHPILESIHNDFVSNSI
FMSEATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATIRVVDRIFTRMGTMD
NLESNSSTFMTEMRETAFIMQNVSNRSLIVMDELGRATSSSDGLAMAWSCCEYLLSLKAY
IVFATHMDSLAELATIYPNVKVLHFYVDIRDNRLDFKFQLRDGTLHVPHYGLLLAEVAGL
PNTVIETARTITSRITDKENKRIELNCVKHHEIHRIYRVAQRLICLKYSSQTEDSIRQTL
QNLRDSFIEQRL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgggggagagagatcgagcttcgtcgccggcctcattgagaacagagcc
aaagaggtcgggatggctgcttttgacctaagatcggcttcactgcatctatctcagtat
atagagacgagcagctcataccaaaacacgaagacgctattgcgtttctatgatccaact
gtggtaatcgttcctcccaacaaattagcagctgatggcatggttggtgtatcagaactg
gtggatcgatgttatagcactgttaggaaggttgtgcttgcccgtggctgttttgatgat
actaagggtgctgtattaatacaaaacttggctgcagaagaacctttggctcctggttta
gacacttactataagcagcattatctctcattggctgctgctgcagctacgatcaaatgg
attgaggcggaaaagggtgtgataatcaccaaccactcactgactgtaacttttaatgga
tcgtttgatcacatgaacatcgatgcaactagtgttgagaatctggaaatcattgatcca
ttccataacgcacttttgggcactagcaacaaaaagaggagtctgttccagatgctcaag
acaacaaaaacagttggcgggactaggcttcttcgagccaatttgttgcagcctctgaaa
gatattgaaactattaacactcgcctggattgcctggatgagttgatgagtaatgaacaa
ctattctttgggctctcacaggttttacgtaaatttcctaaagagactgatcgagttctt
tgtcatttctgcttcaagccaaagaaagtcacagaagcggtcctaggttttgataatacc
agaaagagccaaaacatgatttcaagcatcatcttacttaagactgcattggatgctttg
cctctacttgctaaggttttaaaggacgcaaagtgttttctccttaccaatgtttataag
tctgtgtgtgaaaatgataaatatgcttccatcagaaaaaaaattggggaggttattgat
gatgatgttctccatgcacgggttccttttgttgcccgcacacagcagtgttttgcttta
aaagccggaattgatggatttttggatattgcaaggagaaccttttgtgatactagtgaa
gcaatacataatctggcgagtaagtatcgtgaggaattcaacttgccaaatctaaaactc
cctttcaacaacaggcaaggcttctttttcagaattcctcagaaggaagttcagggaaaa
cttccaagcaaattcactcaggttgtaaaacatgggaaaaatatacattgttcgagtctg
gaactggcttctttgaatgtcaggaataagtctgccgctggagagtgtttcattcgaacg
gaaacatgcttggaagcactgatggatgcgataagggaagatatctctgccctcacactc
ctagcagaagtcttatgtctcctagatatgattgttaattcatttgctcatacaatatcc
acaaagccagtggatcgatactctagacctgaactaacagaaagtggcccactggcaatt
gatgctggaaggcatcccatcctagaaagcatacacaacgactttgtttctaatagtatc
ttcatgtcagaagcaaccaacatgttggtagttatgggtccaaacatgagcggaaagagc
acatatctccaacaggtgtgtctagtagtcattctcgctcagattggctgctacgtccca
gctcgctttgcaactataagggtggttgaccgcatatttacaagaatggggacaatggat
aaccttgagtcgaactcaagcacgtttatgacagagatgagagagaccgctttcataatg
cagaatgtctccaacaggagtttgatagtcatggatgaactcgggagggcgacttcttcc
tcagacgggttagcaatggcatggagctgctgcgagtatctcttatccctgaaagcgtac
atagtatttgcaacccacatggatagtctcgctgagctagcaaccatctatccaaatgta
aaggttcttcacttttatgtagacatcagagacaaccgcttagacttcaagtttcaattg
cgagatggaaccctacatgttccacactatggccttctattagccgaagtggctggtctg
cctaatacagtgattgaaacagctaggaccataacctcaagaatcacagacaaggaaaat
aaaagaatagagctaaattgtgtgaagcaccacgaaatacataggatctaccgagttgct
caaaggttgatatgcttgaaatactcttcacagacagaagactcaattcgtcaaactctc
caaaatctaagggacagtttcatcgaacaaaggctctaa
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