Camelina sativa (false flax): 104734366
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Entry
104734366 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104734366
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104734366
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104734366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_11
WD40_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
104734366
NCBI-ProteinID:
XP_010452226
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Position
13:complement(1101400..1105012)
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AA seq
611 aa
AA seq
DB search
MSTRRRYSGPGVRIAQYIESEDEGEDYGEEVVGEEDEESEEEEEEEEEQEEDTESQARDV
VVSPRVSQNESQENQKMSQGICSSSGSQEDVEWKHGETEGLFCLICMEVWTNDGEHQVCC
LPCGHLYGFSCIKKWLQQRGSAGKCPQCIRKCSLRDVRKIYASRVAAVDDEAQKRILFLE
AKLSSIEQKTASWSNKEAQWKKMEAELQLEVNKLKKKIADMESMAMGAQRNSNVASQNQY
IHGHTNYQEHHGQAPSCSFRHQGDLLVSGGRLFDIDGGRKIVLLARRLSGVGGTFVLTQM
SLHSGEIDDILLPPTTRAIKDLHLSPHNNGLAVFGSLGKKLSVISLESHNTVLSYDLPAA
PWSCSWDLNSSHYIYAGLQNGKVLVFDRRQTTGPFASLTGLTTNPVHTIHHLSTNSTPTS
DVRALLSASSIGLCQWNINGSEGSPSLITETGNPGVCISSSYCPRSDHIVASYRPRVGGS
SEDTVQTQPSLTQTGVNSNGVDGFHVSLKRRGGDSYYQKLSSTQAFVDNIRLPRTAIIDF
GEGKNQQLFASCDESTRELILQDPLNFAVSQRFPMSSHLPLQDVKYAHXNGTGLLGLLND
EKLQLFRNEYW
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactcgccggcgttactccggtcccggagtaagaattgcacaatacattgaatct
gaggatgaaggagaagactatggagaagaagtagttggagaagaagacgaagaaagcgaa
gaggaggaggaggaggaggaggagcaggaagaagataccgaaagccaagccagggatgtt
gtagtctcacctagggtttcacagaatgagagccaagagaatcagaaaatgtcacaaggt
atttgttcatcttcaggatcgcaggaagatgtggaatggaaacacggcgagactgaggga
ttgttctgtttgatttgtatggaagtttggaccaacgatggcgaacatcaagtctgttgt
cttccatgtggacacttgtatgggttttcctgcatcaagaagtggctacagcagcgggga
agtgcaggaaagtgtccgcaatgcattagaaaatgtagcctgagagatgtccggaaaatc
tatgcatcacgtgttgctgcagttgatgatgaagcacaaaagagaatcttatttctggag
gccaagttaagctcaattgaacagaagactgcaagctggagtaacaaagaagctcaatgg
aagaaaatggaagcagagctacaattagaagttaataagctgaagaagaagatagctgat
atggaaagtatggctatgggtgcgcagagaaactctaatgtggcttctcagaatcaatat
atacatggtcatacaaactaccaagaacatcatggacaggcaccttcttgcagcttcaga
catcagggagatttgctagtcagtggtggccgtttatttgacatagatggtggtcgaaaa
attgtgttattggctcgtaggctctcaggcgttggtggaacatttgtgcttacgcaaatg
agcctacattcgggtgagattgatgatattttgttgcctcctaccacaagagcaattaaa
gatcttcacctttcccctcacaataacgggcttgcagtatttggttctctaggaaaaaaa
ttatctgttataagcttggagagccacaacactgtcttatcgtatgatttaccagctgca
ccttggtcttgctcctgggatctcaacagctctcactatatttatgctggactacagaat
ggaaaggttttagtatttgacaggcgtcaaacaacgggacctttcgcatcgttgactggc
ttaacaaccaatccagtccatactatccatcatctctctaccaactccactccaacttct
gatgtccgtgccctcttgtcagcttcctccatcgggctgtgtcagtggaacattaatggc
agcgagggaagcccatcattaattacagaaacaggaaacccaggagtttgcatatcatcc
tcgtattgtcctcgcagtgatcatatagtggcttcttatagaccgagagttggtggatct
tctgaagatacagtccagactcaaccttcgttgacccaaacaggagtcaatagtaatggt
gtagatggatttcatgttagtctcaagagaagaggtggtgattcttattaccagaaactg
tcatccacacaagcttttgtagataacatacgtctgccaagaacagcgattatagacttt
ggtgagggaaagaatcaacaactatttgcatcttgtgatgagtccactcgggagctcatc
ttgcaagatcctttgaattttgccgtctctcaaaggttcccaatgtcaagtcatcttccg
ctccaagacgtaaaatacgctcatngtaatggaacgggtctgcttggtctcttaaacgat
gagaaattgcagctttttaggaacgaatattggtag
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