Camelina sativa (false flax): 104739987
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Entry
104739987 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104739987
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104739987
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104739987
03036 Chromosome and associated proteins [BR:
csat03036
]
104739987
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104739987
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104739987
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104739987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
HEAT_EZ
Htt_N-HEAT_1
SCD
Adaptin_N
Cnd1
CLASP_N
Motif
Other DBs
NCBI-GeneID:
104739987
NCBI-ProteinID:
XP_010458784
LinkDB
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Position
14:complement(6376650..6380913)
Genome browser
AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSIIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLSTVEETCVREKAVESLCRIGSQMREN
DLVEHFFPLAKRLSAGEWFTARVSACGIFHIAYPSAPDPLKAELRSLYSQLCQDDMPMVR
RAAATNLGKFAATIESAHLKTDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVT
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQRVLPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVHSIREAAANNLKRLAEEFGPEWAMQHIVPQV
LEMINNPHYLYRMTILRAVSLLAPVMGSEITCSKLLPAVITASKDRVPNIKFNVAKMMQS
LIPIVDQSVVENMIRPCLVELSEDPDVDVRFFANQALQSIDNVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggttgatgagcctctatacccgattgccgtgcttatagacgagcttaagaac
gatgatattcagcttagactgaactctattagacggctttctatcattgctcgtgctctt
ggagaggagaggactagaaaagagttgatcccatttcttagtgaaaacaatgacgatgac
gatgaggtgcttctcgccatggccgaagagttgggtgtttttattccttatgttggaggc
gttgagcatgcacatgttttgcttccaccgctggagactctctcgactgttgaggaaact
tgcgtgagggaaaaggctgtagagtcactttgcagaattggttctcagatgagggagaat
gacttggttgagcatttctttcctctcgctaagcgactttcagctggtgagtggttcaca
gctagggtatcagcatgtgggattttccatattgcatacccaagtgctccagatccgcta
aaggcggagctaagatcattatacagtcagctgtgtcaagatgacatgccaatggtgcgc
agagctgcagcaacgaatttggggaagtttgctgctacaattgaatcagctcatttgaag
actgacattatgtccatgtttgaggatcttacgcaagatgatcaagattcagttagatta
ttggctgttgagggttgtgctgctcttgggaaattgttggagccccaggactgtgtcaca
cacattcttcctgtaattgtcaatttctcgcaggataagtcatggcgtgtgcgttatatg
gttgcaaatcagctctatgaactttgtgaagctgtaggaccagagccaactaggacggat
ttggtgcctgcatatgttcgtctactacgtgataatgaggctgaagttcggatagcagct
gccggaaaagttaccaagttttgtcgcatattaaaccctgaactcgcgatccagcgtgta
cttccctgtgtaaaggaattatcatcagactcttctcagcacgtccgatctgcattggcc
tcagttataatggggatggctccagtcttgggtaaggatgcaacaattgagcatcttctt
ccaatctttctttctctattgaaggacgaatttcctgatgtacgcttaaacattatcagc
aaacttgaccaagtgaaccaggttattgggattgatctactatcacaatctttattgcca
gccattgtagaacttgctgaagacaggcactggagggtacgtctggctataattgagtat
attcccttgttggccagccaattaggtgtaggcttctttgacgacaagcttggtgctctc
tgcatgcaatggttgcaagacaaggttcactcaatccgcgaagctgctgcgaacaatctt
aagcgtcttgctgaagagtttggtcctgaatgggcaatgcagcatatagttcctcaggtt
ctagagatgattaacaacccacactatctataccggatgacaattcttcgtgcagtatcg
cttctcgcaccagtaatgggatccgagatcacttgttccaaactcttgcctgcggtaata
actgcatctaaagacagagtgccaaacatcaaatttaacgtcgccaaaatgatgcaatct
ctcattccgatagttgaccaatcggttgtggagaacatgatacggccatgcttggtggag
ctaagtgaagacccggacgttgatgtacggttcttcgcaaatcaagctctccagtctatt
gacaatgtgatgatgtctagctaa
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