Camelina sativa (false flax): 104746597
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Entry
104746597 CDS
T05044
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104746597
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104746597
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104746597
03036 Chromosome and associated proteins [BR:
csat03036
]
104746597
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104746597
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104746597
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104746597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
104746597
NCBI-ProteinID:
XP_010466418
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All DBs
Position
15:complement(12625966..12628672)
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AA seq
524 aa
AA seq
DB search
MIKQIFGKLPRKPSKSLQNESNGEGGVNSYYAPNSTTSSTSSVSKPSSKSSASGSRVVNG
TLAPNQGKKPLGGDAVGGVNEALPSFRDVPMSEKPNLFIGKLSMCCVVFDFSDPSKNLKE
KEIKRQTLLELVDYIATVGVKFNDVAMQELTKMVAVNLFRTFPSANHESKILEMHDMDDE
EPSMEPAWPHIQVVYEILLRFVASPMTDAKLAKRYIDHSFVLKLLDLFDSEDQREREYLK
TILHRVYGKFMVHRPYIRKSINNIFYRLISETERHNGIAELLEILGSIINGFALPLKEEH
KLFLLRALIPLHKPKCSSVYYQQLSYCIVQFVEKDIKLADTVIRGLLKYWPVTNSSKEVL
FLGELEEVLEATQAAEFQRCMVPLFRQIARCLNSSHFQVAERALFLWNNDHIRNLITQNH
KVIMPIVFPALERNTRGHWNQAVQSLTINVRKVFCDIDQVLFDECLAKFQVSEENKAEVK
AKRERTWQCLEDLATSNTIVTNEAVLVPRFVSSVNLASSSESTG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacagatatttgggaaattgcctagaaagccttcaaagtctttgcaaaatgag
tctaatggtgaaggaggggttaactcttactatgctcccaattccactactagtagtact
agttctgtttcgaaaccttcttcaaaatcgtctgcttctggttcacgtgtagttaatggg
actcttgctcctaatcaagggaagaaaccattgggaggagatgctgttggtggggttaat
gaggctttgcctagctttagagatgttcccatgtctgagaaaccaaatctctttatcggg
aagttgagtatgtgctgtgttgtctttgattttagtgatccttcaaagaaccttaaagag
aaagagattaaacggcagacattgctcgagctcgttgattatattgcaacggttggtgtg
aagtttaatgatgtcgcgatgcaagagctgacaaagatggtagcggttaatctgtttaga
acgtttccttctgcgaatcacgagagtaaaattcttgaaatgcatgatatggatgacgag
gagccttcgatggaaccagcttggcctcatattcaagttgtgtatgagattctgctcaga
ttcgtggcttctcccatgactgacgcaaagcttgcaaagagatatattgaccattccttt
gttttgaagctgttggacttgtttgattctgaagatcaaagagagagggagtatttaaaa
accattctgcatcgggtgtatgggaagttcatggtgcatcgaccctatatcagaaagtct
attaataatatcttctacagactcatatccgagactgaaaggcataatggtattgcagag
ttgctagagattcttggaagtataattaatggttttgctttgcctttaaaagaagagcac
aagctcttccttttgcgagctttgatacctctgcacaagcctaaatgttcatcggtctat
taccaacagctttcttattgcatagttcagtttgtagagaaggacatcaagctcgctgat
accgttattagaggtcttctaaaatattggcctgtgactaacagctcgaaggaagttttg
tttcttggagaattagaagaagtcttggaagcaactcaagctgctgagtttcaacgctgt
atggtccctttattccgacaaattgctcgatgtctcaacagttcacattttcaggtcgct
gagagggcattgtttctatggaacaatgatcacataagaaacctaatcacacagaaccat
aaagtgataatgccaatagtcttcccagctctagagagaaacacgcgtggacactggaac
caagcagttcagagtctgactataaacgtgaggaaagtattctgcgacattgaccaagtt
ctcttcgacgagtgtttagccaaattccaagtatcagaagagaataaagcagaggtcaaa
gcgaaacgcgaaagaacatggcagtgcttagaagatttagcgacttcaaataccattgta
acgaacgaggcagtgctggttccaagatttgtatcctcagtcaatcttgcaagcagctct
gagtccacagggtag
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