Camelina sativa (false flax): 104755017
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Entry
104755017 CDS
T05044
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104755017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104755017
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104755017
mRNA degradation factors
5'-3' decay
Decapping complex
104755017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
104755017
NCBI-ProteinID:
XP_010475634
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Position
17:3375831..3378524
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AA seq
365 aa
AA seq
DB search
MSQNGKLIPNLDQNSTRLLNLTVLQRIDPYIEEILITAAHVTFYEFNIDLSQWSRKDVEG
SLFVVKRSTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQGPYLLYRNASQEVNGIWFYNK
RECEEVATLFSRILSAYSKVNQKPKTPSSKSEFEELEAVPTMAVMDGPLEPSSTARDAPD
DPAFVNFFSSGMALGNTASGSASGPPYQSSPIPHQPHQPTISPPVPVAAPSQIKSPPLLP
SSSPLMPLFDNNPDLNSSNSSVTDLVTPASFFGPPRMMAQPHLIPGSSMPTAPLLNPNNA
THQQRSYGTPVLQPFPPPTPPLSLAPAPTGPVITRDTVKEALLSLIQTNDFIDMVTRALQ
NAHQS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaacgggaagctgatcccaaatctggaccagaacagtacgaggcttctcaat
ctcacagttctccagcgaatcgatccatacatcgaggaaatcctcatcacagccgctcat
gttactttctatgaattcaacattgatctcagtcaatggagtcgtaaggatgttgaagga
tctttgtttgttgtcaaaaggagcacacaacctcgatttcagtttattgtgatgaatcgt
cggaatacagataatctggtggagaatcttctgggagattttgagtatgaagttcaaggt
ccttatttactttaccgtaatgcatctcaagaagttaatggcatttggttttacaataaa
cgtgaatgcgaggaggtagcaactcttttcagcagaatactgagtgcatattccaaggtt
aaccagaagccgaagaccccatcttcaaaaagtgagtttgaggaattggaagctgtgcct
acgatggcagttatggatggtcctcttgaaccgtcttcaactgctagggatgcccctgat
gatcctgctttcgtcaacttctttagctcaggaatggctcttgggaacactgcgagtggg
tcagcaagtggaccaccttaccaatcatcaccaattccacaccaacctcaccaacccacc
atttctccccctgtaccggtagcagcaccttcacagataaaatcaccaccgcttctacca
tcctcctctcctctgatgcctctgtttgacaacaaccctgatcttaacagcagcaactca
agcgttaccgatttagtgacgccagcctctttctttgggcccccgcgaatgatggcacaa
ccgcacctcattcctggttcgtctatgcccacagctcctctcctcaaccctaataatgca
actcaccagcagcggtcatatggtactccggtgctccagcctttcccaccaccaactcca
ccactatcactcgctcctgcaccgactggcccggttatcaccagagacacagtgaaagaa
gcccttttatccctgattcagactaatgatttcatcgatatggtgacccgagctttacaa
aatgcacatcaatcatga
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