Camelina sativa (false flax): 104755616
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Entry
104755616 CDS
T05044
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104755616
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104755616
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104755616
03036 Chromosome and associated proteins [BR:
csat03036
]
104755616
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104755616
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104755616
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104755616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
HEAT_EZ
Adaptin_N
SCD
Cnd1
CLASP_N
Motif
Other DBs
NCBI-GeneID:
104755616
NCBI-ProteinID:
XP_010476330
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Position
17:complement(6137534..6141765)
Genome browser
AA seq
587 aa
AA seq
DB search
MSTADEPLYPIAVLIEELKNDDIQLRLNSIRRLSIIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLSNVEETCVREKAVESLCRIGSQMREN
DLVEHFFPLAKRLSGGEWFTARVSACGIFHIAYPSAPDQLKAELRSIYSQLCQDDMPMVR
RAAATNLGKFAATIESAHLKTDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVT
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVHSIREAAANNLKRLAEEFGPEWAMQHIVPQV
LEMINNPHYLYRMTILRAVSLLAPVMGSEITCSKLLPAVITASKDRVPNIKFNVAKMMQS
LIPIVDQSVVENMIRPCLVELSEDPDVDVRFFANQALQSIDNVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctacggctgatgagcctctgtacccgattgctgtgctaatagaagagctgaaaaac
gatgatattcagcttagattaaactctattagacggctttctatcattgctcgtgctctt
ggtgaggagaggacaagaaaagagttgatcccatttcttagtgaaaacaatgacgatgac
gatgaggtgcttttggctatggcggaagagttgggtgtttttattccttacgtaggaggc
gttgagcatgcacatgttttacttccaccgctggagacactctctaacgttgaggaaact
tgcgtcagggaaaaagctgtagagtcactttgcagaattggttctcagatgagggagaat
gacttggttgagcatttctttcctcttgctaagcgactttcaggtggtgagtggttcaca
gccagggtatcagcatgtgggatttttcatattgcatacccaagtgctccagatcagcta
aaggcggagctaagatcaatatacagtcagctgtgtcaagatgacatgccaatggtgcgc
agagctgcagcaacgaatttggggaagtttgcagctacaattgaatcagctcatttgaag
actgacattatgtccatgtttgaggatcttacgcaagatgatcaagattcagttagatta
ttggctgttgagggttgtgctgctcttgggaaattgttggagccccaggactgtgtcaca
cacattcttcctgtaattgtcaatttctcgcaggataagtcatggcgtgtgcgttatatg
gttgcaaatcagctctatgaactttgtgaagctgtaggaccagagccaactaggacggat
ttggtgcctgcatatgttcgtctacttcgtgataatgaggctgaagttcggatagcagct
gccggaaaagttaccaaattttgtcgcatattaaaccctgaactcgctatccagcacatc
cttccctgtgtaaaggaattatcatcagactcttctcagcacgtcagatctgcattggcc
tcagttataatggggatggctccagtcttgggtaaggatgcgacaattgagcatcttctt
ccaatctttctttctctattgaaggacgaatttcctgacgtacgcttaaacattatcagc
aaacttgaccaagtgaaccaggttattgggattgatctactatcacaatctttattgcca
gccatagtagaacttgctgaagacaggcactggagggtacgtctggctataattgagtat
attccattgttggccagccaattaggtgtaggcttctttgacgataagcttggtgctctt
tgcatgcaatggttacaagacaaggttcactcaatccgcgaagctgctgcaaacaatctt
aagcgtcttgctgaagagtttggtcctgaatgggcaatgcagcatatagttccccaggtt
ctagagatgattaacaacccacattatctataccggatgacgattcttcgtgcagtatcg
cttcttgcgccagtaatgggatccgagatcacatgttcaaaactcttgcctgcggtaata
actgcatctaaagacagagttccaaacatcaaatttaacgtcgccaagatgatgcaatcc
ctcattccaattgttgaccaatcggttgtggagaacatgatacggccatgcttggtggag
ctaagtgaagacccagacgttgatgtacgattcttcgcaaatcaagctctccagtctatt
gacaatgtgatgatgtctagctaa
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