KEGG T05044: 104770611

Camelina sativa (false flax): 104770611

Entry

104770611         CDS       T05044

Name

(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 isoform X1

K15505

DNA repair protein RAD5 [EC:5.6.2.-]

Organism

csat Camelina sativa (false flax)

Brite

KEGG Orthology (KO) [BR:csat00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csat03400]
    104770611
DNA repair and recombination proteins [BR:csat03400]
Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    104770611

SSDB

Motif

Pfam:

SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 DEAD zf-RING_UBOX zf-RING_2 ResIII Prok-RING_4 zf-RING_5 zf-C3HC4_4 zf-ANAPC11 zf-RING_4

Other DBs

NCBI-GeneID:

104770611

NCBI-ProteinID:

XP_010493367

LinkDB

Position

20:complement(12542424..12548479)

AA seq 1020 aa
MGTKVSDDVVSTVRSVVGSDYSDMDIRRALHMANHDPTAAINIIFDTPSFSKPPDVVAAT
PSPSGGSNGGKKVDNGIKGCAFASVGANHRVEEEEDESGDGGEESVSGNEWWFVGCSELA
GLSTCKGRKLKSGDELVFTFPHSKGSKSETTPGKRGSGRGRPALRGGASDIVRFSTKDSG
EIGRIPNEWARCLLPLVRDKKIRIEGSCKLAPETLSIMDTILLFVSVYINSSMFHKHSAT
SFKAASNTAEESMFHPLPNLFRLLGLIPFKKAEFTPEDLSTRKRPLSSKNGSAVSAPSLQ
LNKVKTLNQDENRDENEPCISDGDLDNIVGVGDSSGLKEMETPHKLLCELRPYQKQALHW
MTQLEKGNCTDEAATMLHPCWEAYYLADKRELVVYLNSFTGDATIHFPSTLQMARGGILA
DAMGLGKTVMTISLMLSHPWKAEGEKVISSSLDEFTSLPKATKFPGFDKKLLEQKSVLEN
GGNLIVCPMTLLGQWKSEIEMHTKSGSLSVYVHYGQSRPKDTKLLSQSDVVITTYGVLTS
EFSAENSADNEGLYAVRWFRIVLDEAHTIKNSKSQISVAAAALVADRRWCLTGTPIQNNL
EDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKSSTDREG
RPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVAQGKVLHNYASILELLLRL
RQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGLERDGKDVPSVAFVQEVVEELRKG
EQGECPICLEACEDAVLTPCAHRLCRECLLASWRNSASGLCPVCRKTVSKQELITAPTES
RFQVDVEKNWVESSKITALLEELESLRSSGSKSILFSQWTAFLDLLQIPLSRNNISFVRL
DGTLNQQQREKVLKDFSEDASIMVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAV
MRLHRIGQTKEVKIRRFIIKGTVEERMEAVQARKQRMISGALTDQEVRSARIEELKMLFT

NT seq 3063 nt +upstreamnt +downstreamnt
atggggacgaaagtttcagacgatgtggtttccacagtcagatcagtcgtgggttccgat
tactcagatatggacataagacgggctttacacatggcgaatcatgacccaacggcagcc
atcaatatcatcttcgacactccaagtttcagcaaaccacctgatgttgtagccgccact
cctagcccaagcggcggctctaatggagggaagaaggttgacaatggtataaagggatgt
gctttcgcaagtgttggagcgaatcatcgcgtggaggaagaagaagatgagagtggtgat
ggtggtgaagagagtgtttcagggaatgagtggtggtttgtgggttgttctgaattggcg
gggttgtcgacatgtaaaggaaggaaattgaagtccggtgacgaattggtgttcacgttt
ccgcatagtaaaggatcaaagtctgagactactcctgggaagcgcggctctggacgggga
aggccagctttgcgtggtggtgcttctgatatcgttaggttctctacaaaggattcagga
gagattggtagaataccaaatgagtgggcacggtgtcttctaccgcttgtgagagacaag
aaaattcggatagaagggagttgcaagttggcgcctgaaacattgagtatcatggataca
attcttctttttgtaagcgtgtacattaatagttccatgtttcataagcatagtgcaaca
tcatttaaggcagccagtaatacggcagaggagtcaatgtttcatcctctcccaaatctc
tttcggttactcggtttgatcccctttaagaaggcagagtttactcctgaggacttgtcc
actaggaagcgacctttgagttccaagaatggttctgctgtttcagctccgtcgcttcag
ttaaacaaggtcaagactctgaatcaagatgaaaacagagatgaaaatgagccgtgtatc
agtgatggtgatcttgataatattgtcggtgttggggacagttctggattaaaggaaatg
gaaactccacataaacttctgtgtgagcttcgtccatatcaaaagcaggcacttcattgg
atgacccaattggagaaaggaaattgcactgatgaggcagcaacaatgcttcacccatgt
tgggaagcgtactatttagcagacaagagggaacttgttgtctacctgaattcttttact
ggtgatgctacaatacactttcctagcacccttcaaatggcaagaggaggaattttagca
gacgcaatgggtctcggaaagaccgtaatgaccatatcccttatgctttcccatccttgg
aaagctgaaggagagaaagtgatcagcagttctttagatgagttcactagtctcccaaag
gcaaccaaatttccaggctttgataagaagcttcttgaacagaaaagtgtacttgaaaat
ggtggtaacctgattgtatgtccgatgacacttttaggacagtggaagtcagagattgaa
atgcatacaaagtcggggtctctatctgtctatgttcattatgggcaaagtaggccaaag
gatacaaaacttctttcccagagtgatgtggtaatcaccacatatggagttttaacatcc
gaattttcggcagagaactcagcagacaatgaagggctttatgctgttcgatggtttagg
attgttcttgatgaggcacataccatcaaaaactcaaaaagccaaatttccgtggctgct
gcagctctggttgctgatcggcgttggtgtcttacgggtactcctattcagaacaatctg
gaggatttgtacagccttctacggtttttgagaattgagccatggggaacttgggcatgg
tggaataaacttgtccaaaagccatttgaagagggcgatgagagaggcctaaagctagtg
cagtcaatcttaaaacccatcatgcttaggagaaccaagtctagcacagatcgagaagga
aggccgattcttgttctaccccctgctgatgcacgggtcatttactgtgaactctcggag
tctgagagggatttctacgatgcgctatttaaaagatccaaggtcaaatttgatcaattc
gttgcacaagggaaagttcttcataattatgcttcgatcctggaactgcttttgcgtctt
cgacagtgttgtgatcacccatttttagtgatgagtcggggtgatacagcggaatactct
gatctgaataagctctctaaacgtttccttagtggaaagtcttctggtctagaaagggat
ggaaaagatgtaccatcagtggcttttgttcaggaggtggtagaggaactgcgcaaagga
gaacaaggagagtgtccaatatgccttgaagcatgtgaggatgccgtattaacaccatgt
gctcatagattatgtcgtgagtgtcttttggcaagttggcgaaattctgcttctgggtta
tgtcctgtgtgtaggaaaactgtaagcaaacaagaactcatcacagcaccaaccgagagt
agattccaggttgacgtggaaaagaactgggtagaatcatccaaaatcactgctcttctg
gaagagcttgaaagtcttcgttcttcaggctctaagagcattctctttagccaatggacc
gctttcctcgatctcctccaaattcccctctctcggaacaacatttcatttgtccgtctt
gatggcacactaaatcagcagcaacgagagaaagtccttaaagacttttccgaggatgcc
agtataatggtactgttgatgtctctaaaagctggtggtgtcgggataaatctaacagct
gcgtccaatgcttttgtcatggatccatggtggaatccagcggtagaggaacaggctgtc
atgcgtctccatcgtattggacagactaaggaagtcaaaatcagaagattcatcattaag
ggtacagttgaagagagaatggaggcggttcaggcgaggaagcagagaatgatctctggg
gctttaacggatcaagaagtacgaagtgcgcgtatagaggaactcaagatgttatttacc
tga

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