KEGG   Camelina sativa (false flax): 104771504
Entry
104771504         CDS       T05044                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csat03400]
    104771504
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    104771504
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN DEAD zf-C3HC4_3 ResIII zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 Prok-RING_4 zf-C3HC4_4 AAA_34
Other DBs
NCBI-GeneID: 104771504
NCBI-ProteinID: XP_010494334
LinkDB
Position
20:23468402..23474224
AA seq 1270 aa
MVTEEAEIRITESQAVSSSDECKIVADTPDLIDGSSLVVRTTIGVRISALSSKQSLGETD
VGCSNNESDSDPSFGVVVVPAIALPTAKEEVTVACVNKDFLESDSFRATGLEIRVVKEEE
PDLLYVENRVSDNKEDEMISDFIEMSVVEIVSSASGGDCDVKVEVVEPELVVVKEEEEEE
EEEEEMIVDSKTKSVAETVSDYDCVSVTVKEEPDVGTLEEKHDSVCPSVLRKKDEVIGVQ
EGEPSEVNGLLQENKKLEQENGLLSPGDLDGASAKRRKMEVEPSVPVGFKNFILAPTPLR
VVKPENLDTPEVIDLESKNLNSIVKQESSYTHVKMEPVEEMKVKTVKLRPQVNDMKFIRE
QKPLYVKKEPIEARKVKVEDGDFPVEKDWFLVGRSLVTATSTSKGRKLEDNEIVNFTFSS
VLNWKVPNIVRFSTKRCGEIGRLPMEWSNWAVCLLRSGKVKMLGRCVAAPAILTMMQEIM
LYVSFYIHSSIFTDVSKSTWRIGSSPNVDSTLHPLLQLFKHLTIKPYQKAEFTPEELNSR
KRSLNLENDFDERAALLAIAKRRKGCPQSLEQNKDEEDAPESYMNRIVGAVDSYNLEEME
APNTLTCNLRPYQKQALYWMSESEKGIDVEKAAETLHPCWEAYRICDERAPSIYVNIFSG
EATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPENEDDMTADVNADKRKR
KECHTALTIVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIAS
HDVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRW
CLTGTPIQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDRRGLKLIKAILRPLML
RRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHN
YANILELLLRLRQCCNHPFLVMSRADSQQYADLDSLARRFLDNNPDSVSQNAPSRAYIEE
VIQDLRDGNSQECPICLESADDPILTPCVHRMCRECLLSSWRSSSCGQCPICRTILKRTE
LISCPTDSIFRVDVVKNWKDSSKVSELLKCLEKIQKSGSGEKCIVFSQWTSFLDLLEIPL
RRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAASSVFLMDPW
WNPAVEEQAIMRIHRIGQKRTVCVRRFIVKGTVEERMQQVQARKQRMIAGALTDEEVRSA
RLEELKMLFR
NT seq 3813 nt   +upstreamnt  +downstreamnt
atggttacagaagaagcggagatccgtataaccgaatcccaagctgtttcgagttccgat
gagtgtaaaatcgttgctgacactcccgatttgattgacggatcctctcttgtcgtcaga
acaaccatcggagtccgaatctcagctctatcgtcgaagcaaagccttggagagactgat
gttggttgctcaaacaatgaatctgattcagatccttcttttggtgttgtggtggtgccg
gcgattgctttaccaacggcgaaagaagaggtaactgttgcttgtgtgaataaagatttt
ttagaatctgattcatttagggcgacgggtttagagatccgtgttgtgaaagaggaggaa
cctgatttgttgtatgttgagaatagagttagtgataataaagaagatgagatgattagt
gatttcatagaaatgtctgtggttgaaattgtttcgagtgcttcgggtggtgattgtgat
gtgaaggtagaggtagtcgaacctgaactggtggttgttaaagaagaagaagaagaagaa
gaagaagaagaagaaatgatcgttgattcgaaaacgaaatctgtggctgaaacggtttct
gattacgattgtgttagtgtcacggttaaggaagagcctgatgtaggtacactagaggag
aaacacgattctgtctgtccgagtgtgctcagaaagaaggatgaggtgattggagttcag
gaaggcgagccaagtgaggttaatggattgttgcaagaaaataagaagttagagcaagag
aatggtctgttatcgcctggagatttggatggtgcttcagctaaaagaaggaaaatggaa
gtggaaccatctgttcccgttggtttcaaaaactttatcctggctccgacgccccttcga
gttgtgaaaccagagaatttggatacccctgaagttattgatctggaatcaaagaatctg
aatagcatagttaaacaagagagcagttatactcatgtgaagatggaaccggttgaggaa
atgaaggtgaaaactgtgaagttgcgtccgcaagtgaacgacatgaaatttattcgtgag
cagaaaccgctgtatgtgaagaaggaaccgattgaagctagaaaggtgaaagtggaagac
ggagattttccagtggagaaagattggtttttggttggaaggtcacttgtcacggctact
tcgacaagcaaaggaaggaaattagaagataatgagattgtgaatttcacattttcctct
gttctcaactggaaagtcccaaatattgttcgtttctctactaaaagatgtggagagatt
ggtaggcttccgatggagtggtctaattgggctgtgtgccttttgagatctggtaaggtc
aaaatgcttggaagatgtgtagcggcaccagcaattcttacaatgatgcaagaaattatg
ttatatgtcagtttttacattcacagctcgatattcaccgatgttagcaaatccacttgg
cggattggttcttccccaaacgtcgattctacgcttcatcctcttctccagcttttcaag
cacttgacaatcaaaccttaccaaaaggcggagtttactcctgaggaactcaactctcgt
aaacgttcgctgaatttggagaatgactttgatgaaagagcagcattgttggccatagcg
aaaagaagaaaaggttgtccacagtctctggagcagaacaaagatgaagaagatgctcct
gagtcatatatgaatcggattgtcggcgctgtagattcatataacctagaggaaatggaa
gctccaaatacactcacgtgtaacctgagaccgtaccagaaacaagctctctactggatg
tcagaatctgaaaaaggaattgatgttgaaaaggcagctgaaactctacatccttgctgg
gaggcatatcgaatctgtgacgagagggcaccttcaatatatgtgaacatcttcagcggt
gaagcaacaatccagtttccaacagcaacacagatggcgagaggcggaatattggcagat
gccatgggacttggaaaaactgtgatgacaatagcactaatacttgcacggcctggccga
ggtaacccagaaaatgaagatgacatgacggcagatgttaatgcagataaacgcaagagg
aaggagtgtcatactgcactaacaattgtgaaggcaaaaggaggcactcttattatttgt
cccatggcactgttaagccaatggaaggacgagcttgagactcattcaaagcctgacact
gtgtctgtattagtttactatggaggggacaggacacatgacgcgaaagcaatagcaagt
catgatgttgtgttgacaacttatggtgtcttaacctcggcatacaagcaggatatggcg
aacagtatcttccataggattgattggtacaggattgttcttgatgaagctcacacaatc
aaatcgtggaaaactcaagctgctaaagctacgtttgagttgtcctcacattgcagatgg
tgtctgactgggactcccatacaaaacaaactcgaagatctttacagtcttctgtgcttc
ctgcatgtcgaaccatggtgcaattgggcttggtggagtaagttgattcagaagccttat
gaaaatggtgatcgacgaggactgaagctgatcaaggcgattctgaggccattaatgctg
cgaagaacaaaggaaacaagggacaaagaaggaagtctaatccttgaacttcctcctacc
gatgtccaagtcattgaatgtgaacaatctgaagcagaacgagacttctatactgccctt
ttcaagagatccaaagtccaatttgatcagtttgtggcacaaggaaaagttcttcacaac
tatgcaaacatcctcgagctcctcctccgtctacgccaatgttgtaaccacccttttcta
gttatgagccgagcagattcacaacagtacgctgacttagatagccttgcaaggaggttt
cttgataacaaccctgactctgtttcccaaaacgctccttctcgggcatatatcgaagaa
gtaatccaagatttacgcgatggcaatagccaagaatgtccaatctgtttggagtctgca
gatgatcccattctcacaccttgtgtacatagaatgtgccgtgaatgtctcctttctagc
tggcggtcttcgtcttgtggtcaatgccctatctgcaggacgatcctgaagagaaccgag
ctgatctcatgcccgacggatagtatattccgtgttgatgtggtaaagaactggaaggat
tcttcgaaggtttctgagctgctcaaatgtttagagaagatccagaaatctggttcggga
gagaagtgcattgtctttagccagtggacttcatttttggatcttttggagatcccattg
cgaagaagaggattcgagtttctgagattcgacgggaagctggctcagaagggaagagaa
aaggttttgaaagagttcaatgaaaccaaacagaaaacaattctgcttatgtctctgaaa
gctggaggagttggtctgaatctaactgcagcttcaagtgttttcttaatggatccatgg
tggaatccagctgtggaagagcaagcgatcatgagaattcatcgaatcgggcagaaacga
acagtttgcgtcagaagattcattgtcaagggtacagtggaggaacggatgcagcaagtt
caagcgaggaagcagcggatgatcgccggagctttaacagatgaagaagtccggtcggca
agacttgaggagctgaaaatgttgttccgatga

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