Camelina sativa (false flax): 104781898
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Entry
104781898 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase ATL9-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104781898
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104781898
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
104781898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_16
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
104781898
NCBI-ProteinID:
XP_010504990
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Position
4:complement(22715366..22716904)
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AA seq
427 aa
AA seq
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MIHSNATTLTPPWVSTNQTLTLSNHLYIFTPNKTSSSPSLTYDDHHMAILDTNSSLWIPR
CNPVLLLVFFLLLQSVPYGSGQTTPPAPQTKANDPVVIVITVLFIVIFVMVFGSIFCRRS
NAPFYSRPSVFQSTDADAEARVVRITRSTARGLDAEAIESFPTFHYSEVKAVRIGKGGAE
CAVCLCEFEDDETLRMMPPCCHVFHTDCVDVWLSDHSTCPLCRADLFLDQTGDDESSSSE
SYMVSDPGTVSSGTDPDRGRGVLESSDAYLLDGVTWTNSNTTPRSKSTGLSSWHITGILF
PRSHSTGHSLVQPVGNLDRFTLRLPDDVRRQLMKTSRTTMGHVALLPQARSSRSGYRSGS
VGSGRSVFSYGRKNYNNSRRLHSLSFSFSFRSGSVRSAFSGDWPKNLPTSIESGERSFER
LRPDERV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgatccacagtaacgcaacgactcttacacccccgtgggtttccacaaaccagacgttg
actctctctaaccacctttatattttcacaccaaacaaaacatcttcttctccttcactt
acgtacgatgatcatcatatggcgatcctcgatacaaactccagcctttggatcccacgt
tgcaaccctgtcttgcttctcgtcttctttctcttgcttcagtccgttccttacggatcc
ggtcagaccacaccacccgcacctcaaacgaaagccaacgatcctgttgtgatagtgatc
acggttctgttcatcgtgatctttgtcatggtctttggctccatcttctgtcgtcgtagc
aacgcgccgttttactcacgtccctcagtcttccaatccaccgacgcagacgccgaggcc
cgcgttgtcaggatcacgaggtcgacggcgcgtggactcgacgcggaggctattgaatct
ttcccgacgtttcattactcggaggtcaaggcggtgcggatcgggaaaggtggtgccgag
tgtgcggtttgtctctgcgaattcgaagacgacgaaacgctgcgtatgatgcctccttgt
tgccacgtgtttcacaccgattgcgtcgacgtatggctctccgatcattccacgtgtcct
ctctgtagagcggatcttttcctcgaccaaacgggtgacgacgagagtagtagtagtgag
agctacatggtttcggatccgggtacggtttcgtcgggtacggatcctgacagaggaagg
ggggttttggaatcttcggacgcgtatttgctggatggtgtgacgtggaccaatagcaac
acaacgcctcggtcgaagtcaacgggattgtctagctggcatataaccggtattttattc
ccgagatctcactcgaccgggcattcgttggttcaaccggttgggaatttagaccggttt
acgttgaggttaccggatgatgtgagacgccagctgatgaagacatcgaggacgacgatg
ggacacgtggcgttattacctcaggcgaggagttcacggagtggttaccgaagcggtagc
gtcgggagcggtagaagcgtcttctcgtacggacggaagaactataataatagtcgacgg
ctgcattcgctgtctttctcattctcttttcggagtggttctgtccggtcagctttctcc
ggagattggcctaagaatcttccgacatcgattgaatctggtgaacggtctttcgaacgc
ctccgaccagatgaacgagtgtaa
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