Camelina sativa (false flax): 104787137
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Entry
104787137 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 25
KO
K12822
RNA-binding protein 25
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104787137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104787137
Spliceosome [BR:
csat03041
]
Complex A
U1 snRNP components
U1 related factors
104787137
Complex B
104787137
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104787137
NCBI-ProteinID:
XP_010510960
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All DBs
Position
5:17707497..17710565
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AA seq
907 aa
AA seq
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MADGDSSSPATGDLNSQKPEPTTPIPIPNPSPTPPPPPQQHPPQVAALVQPVPPGPPYAP
PSQIPVPTNLPPPPPFRPGMQFNPVANFQNPSSGVPPPVPGSMPQYQGQPPNQAGMRPFQ
PMANGYPGIHGVAPPPGPMPPQGLLRYPSPYPTMVRPGFIMRPPGTIGAVQLAPRPAVPG
MLGLRPIMMPPMVRPPSLPFVAPAEKPQTTIYIGKIATVENEFMMSILEFCGHVKSCLRA
EDPTTKKPKGFGFYEFESAEGILRAIRLLTKRTIDGQELLVNVNQATKEYLLKYVEKKIE
TANKAKESQAVGTEENQAEGSESEREKLESAENETGKDGEPKTKENIDIANSAVLTDDER
EADREAMEKIESAIEERLKSNPLPPPPPPPPADGSGMELAFKSKDGDSNTDITRSDAAAN
DVEASGEHNRPDTSSPDWNKRNDRRSRERSEKEQEMDRYEREAERERARKEREQRRKLED
AERAYQARLRQWERQEREKEKERQYEKEKEKDKERKRKKEIRYEEEEDEEDDESRRRWHR
XSLDERRRRRQREKEDDLADRLKEEEEVAEAKRSAEEQKLQQQQLDALRLLSGQAAIGSE
TVQTSPIENDHNPTLQTVSESVHEHHAADCEQNGSGNESMAIDSNSGSEAHAPSKKLGFG
LVGSGKRTSVPSVFYEEDEDEAHKDKKMKPLVPIDYSTEEQEAVAHGGSGNTPPHLALAA
EFAKRISSTNPKEETTETEKQRSRRSHDKASHRDRDRDRERDRDRDRVRDRGDGHSGPTK
DAKEPGKTKIPDTKFLDAKQLIDTIPKTKEDLFSYEINWAMYDKHQLHERMRPWISKKIM
EFLGEEEATLVDFIVSNTQQHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKRVEAG
VPVKSKA
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcgattcttcttctccggccacgggggatctcaactctcagaaaccggaa
cccactactccgattccaattcccaatccttcaccaactccaccacctccgcctcaacaa
catccgccacaagtcgccgctctggttcagcctgttccacctggtccgccttatgctcct
ccgtctcagattcctgtccccaccaatctcccgccgcctccaccattccgtcccggtatg
caattcaatcccgttgcgaattttcaaaaccctagctctggagttcctcctcccgttcct
ggatccatgcctcagtatcaagggcagcctccgaaccaggctggtatgagacctttccag
cctatggctaatggttacccaggaattcatggtgttgctcctcctccaggtcccatgcct
cctcaggggcttctccggtatccttctccatatccaacaatggttcgtcctgggtttatt
atgcgcccgcctggtacaatcggtgctgttcaactagcaccacgacctgctgtcccagga
atgcttggtctccgtcccataatgatgcctcctatggtcagaccaccctctcttcctttc
gtagcacctgcagaaaagccccagactacaatttacattggcaagatagcaaccgtagaa
aatgaatttatgatgtctattcttgagttttgtggccatgtcaaaagctgtttacgtgcg
gaagatcctaccaccaagaaacctaaaggttttggattctacgaatttgaatcagctgaa
ggaattctccgtgcaatacgcctactgaccaaacgtactatagatggacaagagcttttg
gttaatgttaatcaagcaacaaaggaatatttgttaaaatatgttgagaagaaaatagag
actgcaaataaagccaaggaaagtcaagctgtaggaaccgaagagaaccaagctgaaggt
tctgagagtgagcgagaaaaactggagagtgctgaaaatgagacagggaaggatggagaa
ccaaagactaaagaaaacatcgatattgcaaattcggcggtcctaactgacgatgaaagg
gaagcagacagagaggctatggaaaagattgaaagtgctattgaagaaaggttaaagtcc
aaccctctgcctccaccacccccaccaccacctgctgatggttcaggaatggaacttgct
ttcaaatctaaggatggtgactccaacactgacataactaggagtgatgctgcagcaaat
gatgttgaggcttctggagaacacaataggcctgacacaagctcacctgattggaataag
agaaatgaccgaagaagcagagaaagaagtgaaaaggagcaagaaatggatagatacgag
agggaggctgagcgagaacgagcaaggaaagagagagagcaaaggaggaaacttgaggat
gcagagcgtgcttaccaggctcgtcttcgacaatgggaacgccaagaaagagaaaaggag
aaggaacgacagtacgagaaggagaaagagaaagataaagagcgtaaaaggaaaaaggaa
atccgctatgaagaagaggaggatgaagaggatgatgaatcaagaagaagatggcatagg
nggtcattagatgagagaagaagacggcgacaaagagaaaaggaggatgacttggctgat
agattgaaagaagaggaagaggttgctgaggcgaagaggagtgccgaggagcaaaagttg
cagcaacagcaattagatgccttaaggctcctatctggacaggcagctattggaagcgaa
acagttcagacatcacctattgaaaacgatcataacccaactctccaaactgtcagtgaa
tctgtccatgagcaccatgcagcagattgtgaacaaaatggttctggtaatgaatccatg
gctattgatagtaatagtggatcagaggcacatgctccctcaaaaaaattaggatttggg
cttgtgggatctggaaagcggacatctgtaccttctgttttctatgaggaggatgaagac
gaagctcataaggataaaaagatgaaacctttagttcctatagattactcaaccgaggaa
caggaagccgtggcccatggtggttcagggaatacaccccctcatttggctttagctgct
gaatttgcaaaacgaatttcgagtactaatcccaaggaggaaacaacagaaaccgaaaaa
caaaggagtagacgttctcatgataaggcaagccaccgggacagagacagggacagggaa
agggatagagacagagacagagtcagggaccgaggtgatgggcatagtggtccaactaaa
gacgctaaagagcctggaaaaacaaagatacctgataccaagtttctggatgcaaaacaa
ttgatagatacgatcccaaagacaaaggaagacttattttcatacgagataaactgggct
atgtatgacaagcaccaattgcacgagagaatgaggccgtggatatcaaagaaaatcatg
gagtttctaggagaagaggaagcgacgctggtagatttcatcgtgtcaaacactcaacag
cacgtgaaagcgtctcagatgcttgagctgttgcaatcgattcttgacgaagaagctgag
atgtttgtgctgaagatgtggagaatgcttatatttgagatcaagcgggtcgaagctgga
gtcccggtaaaatccaaagcctga
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