Camelina sativa (false flax): 104788535
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Entry
104788535 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase hel2 isoform X1
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104788535
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104788535
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104788535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
104788535
NCBI-ProteinID:
XP_010512608
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Position
5:complement(34219192..34224137)
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AA seq
813 aa
AA seq
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MDDSCAVCAENLEWVAYGSCGHREVCSTCVVRLRFVLGDPRCCICKTESPTVFVTKALGD
YTRTITDFSTFPQAPKEGRVVGSFWYHEDTQAFFDDLDQYRMIKAMCRLSCGVCDKAEDQ
QPREGGPGPGPRHHHRQRIKSVEQLKGHLYHKHKLHMCGLCLEGRKIFICEQKLYTRAQL
NQHIHTGDSEVDGTESERGGFTGHPMCEFCRNPFYGDNELYTHMTTEHYTCHFCQRSNSG
QYEYYKNYDDLEIHFRRDHFICEDDSCLAKKFIVFQNESELKRHNAVEHGGKMSRSQRSA
ALQIPTSFRYRRGNDQENRRGRARSFRREPGDDDYNHAVHEALRLSEAEYSRQEPAPPPS
SAPPGSSENNNIHRDDAGPLIQPMESLSTTDMEPSSRYLQAVGSSGGGGSRLGESAFPPL
SGPPRSGQNLESLPTNTMAARLRRQTNRTSTASAIASPSQGWPAVNRSAAQTSITTGGNH
SSSGWPAIARTPIQASSSSVQPRSHARVSQPRPLASAVPQAIRNANKIPHSSSAPDLSDT
RSLTPSPSDFPPVSSAVVQNRRISSSTTQGSSNTQPPPDVQSANKSLIEKMRSALGHDED
VFMAFKTVSGQYRQGSIDARTYLEYVNGYGLSHLVIDLARLCPDPRRQKELIDTHNASLE
NGQSAAQSSSQPKDNQNSKKNKGKAVKVVEPKETLAENFMDTVRRLQSSQNLHEGEEEVI
SNDKNTYRSDKGKAQVASPVATSTSSKQPRKKTSKFHRVRLGDGSMAALLDINNSNREVE
SEANVGNFNSNQQQSGVIPFRGVWRKGGANLFS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagctgtgccgtctgcgctgaaaacctcgaatgggttgcttatggatcttgt
ggtcaccgtgaggtttgctcaacatgtgtcgttcgtctccgtttcgtccttggcgatcct
cgttgctgtatctgtaagaccgagtctcctaccgtcttcgtcaccaaggcattgggtgat
tatacaaggacgatcactgacttctcaaccttcccacaagcaccaaaggaaggtcgagta
gtaggatccttttggtatcatgaagacactcaggctttttttgatgacttggatcagtac
aggatgatcaaagctatgtgtaggctttcctgtggtgtttgtgacaaggctgaagatcaa
caaccaagagaaggaggaccaggaccaggaccaagacatcatcaccgtcagcgtattaag
agtgttgaacagttgaagggtcatttatatcataagcacaaattgcatatgtgcggttta
tgtcttgaagggcgaaagatattcatatgtgaacagaagttgtatactagggcacaactg
aaccaacacatacacactggtgactctgaagttgatggtactgagagcgaaaggggaggc
tttactggacatcctatgtgtgagttctgtaggaatccattctatggtgataatgaatta
tatactcacatgactactgagcattacacctgccatttttgccaaaggtcgaattcagga
cagtatgaatattacaaaaactatgatgacttggagattcacttccgcagagaccatttt
atttgtgaagacgattcctgccttgctaagaagtttatagttttccagaatgaatcagaa
ttgaaaaggcataacgctgttgagcatggaggtaaaatgtctaggtctcagcgcagcgct
gcattacagataccaacaagtttccgatatcgacgtggaaatgatcaagagaatcgtcgt
ggaagagcccgatcatttcgtcgtgagcctggtgatgatgattataatcatgcagttcat
gaggctcttcgtttatctgaggctgagtattctcggcaagagcctgctccgccaccctca
agtgcaccacctggatcatctgagaacaacaatattcacagagatgatgctggtcctctt
attcaacccatggaatctctatcaactacagatatggaaccctcttcacgatacctacaa
gctgtaggaagctctggtggtggtggttcacgtcttggagaatctgctttccctcctctt
tctggtccaccgagatctggacagaacttggaaagtttgcctactaacaccatggctgct
cgtctaagacgccaaacaaatcgaactagtactgcttctgctattgctagtccttctcaa
ggatggccagcggttaaccgaagcgcagcacaaacatctattactactggcggtaaccat
tcttcttcaggatggccagcaatagcgcgaacacctatacaagcctctagttcttcagtc
caacctaggtctcatgctagagtttcccagcctagacctctggcttctgcagttccacag
gctattcgtaatgcgaataagattcctcactcatcctcagcccctgatctatctgataca
agatctcttacgccttctccttctgattttcctccagtttcttctgctgttgtgcaaaat
cgtaggatatcatccagcactacacaaggatcttcaaacacccagccacctccagatgta
caatctgccaacaaatctttgattgagaaaatgagatctgcacttggacatgatgaagat
gtattcatggcctttaaaactgtttcaggacagtatcgtcaaggttcgattgatgcaaga
acttacttggagtacgtgaatggttatggattgtctcacttggttatcgatcttgctaga
ctatgccctgaccctagaaggcagaaggaactcattgatacccataatgctagtttagag
aatggtcagtctgctgcacagagctcttctcaacctaaagacaatcaaaattcaaagaag
aacaaaggaaaagcagttaaggttgttgaaccgaaagaaactttagcagagaattttatg
gatacagtgaggagattgcaatcttcacagaatctccatgaaggagaagaggaagtaatt
tcgaatgataagaatacatataggtcagataaaggcaaggcacaagtagcaagtccggtt
gctacatcgacctcaagtaagcaaccacgtaagaaaacttccaagtttcacagagtgcgg
cttggagatggatcaatggctgcgttactagatattaacaattctaaccgtgaggtggaa
tcagaagcaaatgttggtaacttcaatagtaaccaacaacagtctggtgttataccattt
cgtggcgtttggcgtaaaggaggagctaatcttttctcgtaa
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