Camelina sativa (false flax): 104793820
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Entry
104793820 CDS
T05044
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II-like
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104793820
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
104793820
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
zf-RING_2
Lactamase_B
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
Lactamase_B_2
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
104793820
NCBI-ProteinID:
XP_019101781
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Position
6:481920..487196
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AA seq
989 aa
AA seq
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MAIDCFVLGAGQEIGKSCVVVTINGKRIMFDCGMHMGCDDHNRYPDFSLLSKSGDFDNVI
SCIIVTHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELF
TTTHITNCMKKVIAIDLKQTIQVDEDLQIRAYYAGHVLGAVMIYAKVGDAAILYTGDYNM
TTDRHLGAAKIDRLQLDLLISEYGKQIQSCSLVHKCVAGGGKALIPSFALGRAQELCMLL
DDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHNTHNPFDFKNVKDFDRSL
IHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKLMAGKPTTVD
LYNGTKVDVRCKIHQVAFSPHTDAKGIMDLTKFLSPKNVVLVHGEKPSMMILKDKITSEL
DIPCFVPANGETVSVASTTFVKANASDMFLKSCSSPNFKFSNSTQLRVTDQRTADGVLVI
EKSKKAKIVHQDEVSELLHEKNHVVSLAYCCPVKVKGESDNDADLIKQLSSKILKTVSGA
QIHEDENSLQVGSFKGSLCLKEKCMHRTEISSCSEAVFLCCNWSVADLELGWEIISVMKL
NLSFSRGGEREREREETQFSSLVPYQKILMSSTSSDSTAARDQHVPLLRPRREGSSPSSA
RPTALAVLLGRITGHRAPSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASAV
MLVGTVEERPNEPIRVWICGYGLQCLIHVVLVWSEYWRRNTTRRARDLESGDSAAADHED
HSEYDHEEEDSDNSTTYSFAKRCESINTVVSFVWWIIGFYWVVEGGDKLLGEAPNLYWLS
VTFLAIDVFFAIFCIVLACLVGIALCCCLPCIIALLYAVAGTEGVSETELGVLPLYKFKA
FHTNEKNIAGPGKMVPIPTKGLCLATERTLLAEDADCCICLNSYEDGAELHALPCNHHFH
STCIVKWLKMRATCPLCKYNILKGTTDPN
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgattgtttcgtactcggtgctggacaagagattggaaagagctgcgtagtg
gtgacgattaacggtaaaaggataatgtttgattgtgggatgcatatgggctgcgatgat
cacaatcgatacccagatttttctctcctctctaaatccggtgattttgataacgtcatc
tcttgtatcatcgtcactcattttcatatggatcatgttggagcgcttccttacttcacg
gaggtttgtgggtacaatgggccaatttatatgtcgtatcccacaaaggctttgtctcca
ttaatgcttgaggattaccgaagagtaatggtggatagaagaggcgaggaggagctattc
accactacccatataacaaactgcatgaagaaagtaatcgcaatagatttgaagcaaaca
attcaggttgatgaagatcttcaaatccgtgcctattatgcagggcatgtccttggagca
gtgatgatttatgcaaaagtgggagatgcagcaattttgtacactggagattacaatatg
acaacagatagacatctaggagcagctaaaattgacagactccagttggatcttctcata
tcagagtacgggaaacaaatacaaagttgttcactggttcataaatgtgttgctggcgga
gggaaggcactaattccttcatttgctcttggaagggctcaggaactttgcatgctgctt
gatgattactgggagcgtatgaatataaaggttccaatttacttctcatcaggtttgacc
atccaagcaaatatgtattacaaaatgctcatcagctggacaagccagaacgttaaagaa
aagcacaatacgcataacccatttgattttaagaatgttaaagattttgatcggtctctt
atacatgctcctgggccatgtgttctctttgccacacctggtatgctttgtgctggcttc
tcacttgaagtgttcaagcactgggctccgtctcccttgaatcttgttgccttgcccgga
tactctgtagctgggaccgttgggcacaaactgatggccggtaaacccacgacggttgac
ctctacaatggcaccaaggttgatgtccgttgcaagatacatcaagtggctttcagtcct
cacacggatgcaaaaggaataatggatctcacaaagtttctttccccaaagaacgttgta
ctcgtgcacggcgaaaaaccaagcatgatgattcttaaggataagataacctcagagctt
gacatcccctgttttgttcctgccaatggtgaaacagtttcagtagcttcaaccactttt
gtaaaagcaaacgcttctgatatgttccttaaaagctgctccagcccgaatttcaaattc
tcaaactctactcagctccgtgttacagaccagagaactgcagacggggttttggtaata
gagaagagcaaaaaggcgaagattgttcaccaagatgaagtctctgagttgttacatgag
aaaaaccatgtggtctctttagcttactgttgtccagtgaaagttaagggagaatcagat
aacgatgctgatctgatcaaacaattgtcttcaaagatcttgaagacagtgtctggtgct
cagattcatgaagatgaaaacagtttgcaggttggatcttttaaggggtctttgtgtctg
aaagagaagtgtatgcatcgaacagagataagcagttgtagtgaagctgtgttcttgtgt
tgtaactggtctgttgcagatttagagcttggctgggaaatcatcagtgtaatgaaacta
aatctgtcgttttctagaggaggagagagagagagagagagagaagaaactcaattctct
tcgttggttccgtatcagaagatactgatgtcatcgacttcttcagactccacggcggcg
cgtgatcaacatgtgccactactccgcccgcgtcgcgaaggctcttctccttcatcagcc
agacctacagctctcgccgttctattgggacggatcaccggccaccgtgcaccgtcgatg
cttgtgagagagacggcggcgcgtgctctggaggagagacgaatcgattggggttactcg
aaacctgtagttgctgctgatatactctggaacgctgctcttgtgcttgcgtcggcggtt
atgcttgtcggtacagtcgaagaaagacctaacgagccgatcagggtttggatctgtggg
tatgggttacagtgtttgatccatgtggttttggtttggtctgagtattggaggagaaac
acgacgcgtagagctagggatttggagtctggagatagtgccgccgccgatcatgaagat
cacagtgagtatgatcatgaagaagaagacagtgacaattcaacaacttacagctttgct
aaaagatgtgagtctataaacactgtggtatcatttgtatggtggatcattggattctac
tgggttgttgaaggtggtgataagcttttaggagaagctcctaatctttactggttgtcg
gtgacttttctggcgattgatgtcttcttcgccattttctgtattgttttggcttgcctt
gttggaatagctctctgttgctgtcttccctgcatcatcgcccttctttacgccgttgca
ggaacggaaggagtatcagagactgagctgggtgttcttcccctttacaaatttaaggct
ttccataccaacgagaagaacattgccggacctggcaaaatggttcctataccgaccaaa
ggactatgcttagcaactgaaagaacactacttgctgaggatgcggactgttgcatatgt
ctgaactcatatgaggatggtgcagagcttcatgctcttccttgtaaccaccattttcac
tcgacgtgtattgtgaaatggcttaagatgagagcaacatgtcctctctgcaaatacaac
atccttaaaggaacaactgaccccaactaa
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