KEGG   Cannabis sativa (hemp): 115702813
Entry
115702813         CDS       T08987                                 
Name
(RefSeq) histone deacetylase 19 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03082  ATP-dependent chromatin remodeling
csav03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    115702813
   03083 Polycomb repressive complex
    115702813
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csav03036]
    115702813
Enzymes [BR:csav01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     115702813
Chromosome and associated proteins [BR:csav03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     115702813
   HDAC complexes
    Sin3A-HDAC complex
     115702813
    BRAF-HDAC complex
     115702813
    REST complex
     115702813
    SHIP complex
     115702813
    MiDAC complex
     115702813
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     115702813
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    115702813
  Chromatin remodeling factors
   NuRD complex
    115702813
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 115702813
NCBI-ProteinID: XP_030486110
LinkDB
Position
X:2061181..2064883
AA seq 493 aa
MDTGGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ
VHKPYPARDRDLCRFHADDYVHFLRNITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIDDIGYAKGKYYSLNVPLDDGI
DDESYHFLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQSLDEIRAKLLDYLSKLQHAPSVQFHDKPPDTELPEADEDQDDPDERWDDDSDMDI
DDRKLLRCRVKREVDNNELKEQENQKGNAENTKGYDTAEDDTTFPGLDVGSLAINEPSVK
VEQENTNKPADQL
NT seq 1482 nt   +upstreamnt  +downstreamnt
atggatactggtggaaattcactcgcatctggtccagatggagtgaagagaaaggtctgc
tatttctacgacccagaagtgggtaattactattatggacaaggtcatccaatgaagcct
catagaatcagaatgacccatgctttacttgcccactatggtcttcttcagaatatgcag
gttcacaaaccctacccagctagagacagagacctttgccgctttcatgctgatgattat
gtccactttttgaggaatataacccctgaaacccaacaagaccaactgaggcagcttaag
cgtttcaatgttggtgaagactgtcctgtatttgatggtctttactccttttgtcagacc
tatgctggtggctcagttggtggtgctgttaagttgaatcatggtctttgtgatattgcc
attaattgggcaggtgggcttcaccatgctaagaagtgtgaagcttctgggttttgctat
gtcaatgatattgttttggctatattggaactgcttaaacagcatgagcgagtgttgtat
gtggacattgatatccaccatggagatggagtggaggaagcattttacacaactgatagg
gtcatgacagtttcattccacaaatttggagattatttccctggtaccggagacatagat
gatatcggttatgcgaaggggaaatactactctcttaacgtgccacttgatgatggaata
gacgatgagagctaccatttcttgtttaaaccaatcatgggaaaagtgatggaagttttt
aaacccggggctgtggttcttcagtgtggtgctgattccttatccggggacagactagga
tgcttcaatctttctatcaaaggtcatgccgagtgtgtcaaatatatgagatcatttaat
gtaccactgttgcttctaggtggcggtggatataccattcgaaatgttgctcggtgctgg
tgctatgagaccggagttgcgctaggagtagaagttgaagacaaaatgccacagcatgag
tactatgagtactttggtccagactatactcttcacgttgctcctagtaacatggaaaat
aagaattcacgccaatcactggacgaaatccgagctaagttgctcgattatctttccaag
cttcagcatgcacccagtgtccaatttcacgataaacctcccgacactgagcttccagag
gcagatgaagatcaagatgatccagatgagagatgggatgacgattctgacatggacatt
gatgatcggaaacttttacgttgcagagtaaagcgagaagttgataataacgaacttaag
gaacaggagaatcaaaaaggaaatgcagagaatactaaaggctatgatactgcagaagat
gatactacatttccaggcttagatgtgggatctttggcaataaatgaaccaagtgtgaaa
gttgagcaagagaatactaataagccagctgaccagctataa

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