Cannabis sativa (hemp): 115702813
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Entry
115702813 CDS
T08987
Name
(RefSeq) histone deacetylase 19 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03082
ATP-dependent chromatin remodeling
csav03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115702813
03083 Polycomb repressive complex
115702813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115702813
Enzymes [BR:
csav01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
115702813
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
115702813
HDAC complexes
Sin3A-HDAC complex
115702813
BRAF-HDAC complex
115702813
REST complex
115702813
SHIP complex
115702813
MiDAC complex
115702813
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
115702813
Heterochromatin formation proteins
Other heterochromatin formation proteins
115702813
Chromatin remodeling factors
NuRD complex
115702813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
115702813
NCBI-ProteinID:
XP_030486110
LinkDB
All DBs
Position
X:2061181..2064883
Genome browser
AA seq
493 aa
AA seq
DB search
MDTGGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ
VHKPYPARDRDLCRFHADDYVHFLRNITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIDDIGYAKGKYYSLNVPLDDGI
DDESYHFLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQSLDEIRAKLLDYLSKLQHAPSVQFHDKPPDTELPEADEDQDDPDERWDDDSDMDI
DDRKLLRCRVKREVDNNELKEQENQKGNAENTKGYDTAEDDTTFPGLDVGSLAINEPSVK
VEQENTNKPADQL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggatactggtggaaattcactcgcatctggtccagatggagtgaagagaaaggtctgc
tatttctacgacccagaagtgggtaattactattatggacaaggtcatccaatgaagcct
catagaatcagaatgacccatgctttacttgcccactatggtcttcttcagaatatgcag
gttcacaaaccctacccagctagagacagagacctttgccgctttcatgctgatgattat
gtccactttttgaggaatataacccctgaaacccaacaagaccaactgaggcagcttaag
cgtttcaatgttggtgaagactgtcctgtatttgatggtctttactccttttgtcagacc
tatgctggtggctcagttggtggtgctgttaagttgaatcatggtctttgtgatattgcc
attaattgggcaggtgggcttcaccatgctaagaagtgtgaagcttctgggttttgctat
gtcaatgatattgttttggctatattggaactgcttaaacagcatgagcgagtgttgtat
gtggacattgatatccaccatggagatggagtggaggaagcattttacacaactgatagg
gtcatgacagtttcattccacaaatttggagattatttccctggtaccggagacatagat
gatatcggttatgcgaaggggaaatactactctcttaacgtgccacttgatgatggaata
gacgatgagagctaccatttcttgtttaaaccaatcatgggaaaagtgatggaagttttt
aaacccggggctgtggttcttcagtgtggtgctgattccttatccggggacagactagga
tgcttcaatctttctatcaaaggtcatgccgagtgtgtcaaatatatgagatcatttaat
gtaccactgttgcttctaggtggcggtggatataccattcgaaatgttgctcggtgctgg
tgctatgagaccggagttgcgctaggagtagaagttgaagacaaaatgccacagcatgag
tactatgagtactttggtccagactatactcttcacgttgctcctagtaacatggaaaat
aagaattcacgccaatcactggacgaaatccgagctaagttgctcgattatctttccaag
cttcagcatgcacccagtgtccaatttcacgataaacctcccgacactgagcttccagag
gcagatgaagatcaagatgatccagatgagagatgggatgacgattctgacatggacatt
gatgatcggaaacttttacgttgcagagtaaagcgagaagttgataataacgaacttaag
gaacaggagaatcaaaaaggaaatgcagagaatactaaaggctatgatactgcagaagat
gatactacatttccaggcttagatgtgggatctttggcaataaatgaaccaagtgtgaaa
gttgagcaagagaatactaataagccagctgaccagctataa
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