Cannabis sativa (hemp): 115714502
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Entry
115714502 CDS
T08987
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115714502
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115714502
Meiosis-specific proteins
Cohesin complex and associated proteins
115714502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
ABC_tran
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
115714502
NCBI-ProteinID:
XP_030499087
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All DBs
Position
4:91108137..91118169
Genome browser
AA seq
1216 aa
AA seq
DB search
MPARMARGKIVRLELENFKSYKGLQTIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTG
QLRGSQLKDLIYAFDDKEKEQRGRRAFVRLVYQLGNESELQFTRIITSSGGSDYRIDGVS
VTWDEYNSRLKSLDILVKARNFLVFQGDVESIASKNPKELTGLLEQISGSDDLKRDYEKF
EEEKGIAEEKSALVYQKKRTIVSERKQKKEQKEEAEKHLRLQEELKSLKRDYFLWQLFNI
ENDFTKASEELDAEKKSREEVMQELENFELEASKKKKEQAKYLKEITRCEKDIAAKNRKL
DKHQPELLKLKEEMSRINSKMKRSKKELDKKREEKKKHAAEIKQLQKGVQDLTAKLDDNE
KGRDSGEKLKLDDTALREYFRIKEDAGMKTAKLKDEKEVLDRQHHVNIEALKNLEENLQQ
LKNRSSELDTQEEQMKKRLKKIDDSSSKHKSDLTAQKKELRSMHDKHQDARYKYENLKSK
ISEVENQLRELKADRHETERDAKLSQAVEALKRLFQGVHGRMTDLCRPTQKKFNLAVTVA
MGRFMDAVVVDDEQTGKECIKYLKEQRLPPQTFIPLHSIRVKPVIERLRTLGGTARLVFD
VIQFDPALEKAIVYAVGNTLVCDGLEEAKVLSWTGERYKVVTVDGILLTKAGTMTGGTSG
GMEARSKQWDDKKIEGLKKKKEQFESELEELGSIREMQLKESEASGRISGLEKKIQYAEI
EKRSIEDKLANLKKEKQNIKEEIDRITPELLKTKEAIDKRSAEIGKLERRINEIVDRIYR
DFSKSVGVANIREYEENQLKDAQNNAEERLSLSSQLSKLKYQLEYEQNRDMESRINELES
SLSALENDLERIQERETAAKLSAEKDISDIKNLNNEVEEWKSKSEECEKEIQEWKKKASA
ATTAISKHNRQINSKENQIEQLIAKKQEIIEKCELEHISLPVVEDPMDTETSTPGPAFDF
SQLNRTYVQDKRAAEREKLDSEFKHKIDSMVSEIERTAPNLKALDQYEALKEKERAVNEE
FEAARKEEKEIADKFNAVKLERNEKFMAAFRHIEGIIDKIYKQLTKSNTHPLGGTAYLNL
DNEDDPFLSGTKYTVMPPTKRFRDMEQLSGGEKTVAALALLFSIHSFRPSPFFILDEVDA
ALDNLNVAKVAGFIRSKSCEGARTSEDPDIGNGFQSIVISLKDSFYDKAEALVGVYRDSE
RGCSRTLTFDLTKYRE
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgccggccagaatggctcgggggaaaattgttcgtttggagcttgagaatttcaaatca
tataagggacttcaaacaattggtcctttctatgactttactgctataattggccctaat
ggtgcgggaaaatcgaatcttatggacgctattagcttcgtgcttggtgttcgaactggt
caacttcgtggttcgcagttgaaggatctgatctatgcttttgatgataaggagaaggag
cagaggggacgaagggcttttgttcgattggtttatcagcttggtaatgaatctgagctt
cagtttactcggattattactagctccggtggaagtgattataggattgatggagtttct
gtgacgtgggatgagtataattcgaggttgaagtcgttggatattcttgtcaaggctagg
aattttctggtttttcagggtgatgtggagtccattgcatctaaaaaccccaaggaactt
actggacttcttgagcagatttcaggttctgatgacctgaagagagattatgaaaagttt
gaagaagagaaaggtatagctgaagaaaaatcggcacttgtttatcagaaaaaaagaaca
attgtgtcggagaggaagcaaaagaaagaacaaaaggaagaagcagagaaacatctacgt
ttacaagaagaactgaaatcattgaagcgagattacttcttatggcaattgttcaacatc
gaaaatgatttcacaaaggcatctgaggaacttgatgctgaaaagaagagtcgtgaagag
gttatgcaagaactagagaattttgagcttgaagcaagtaagaagaagaaagagcaagcc
aagtatcttaaagagataactcgatgtgaaaaggatattgctgcgaaaaacagaaaactt
gacaaacatcaaccagagcttttgaagttgaaagaggaaatgtcacgcataaactcaaaa
atgaagagaagcaagaaggagcttgataaaaaaagggaagaaaaaaagaaacatgcggct
gaaataaagcagctccagaagggtgtacaagatttgactgcaaagctagatgataatgaa
aaagggcgggatagtggtgaaaaacttaagttagatgacactgcgttaagggaatatttt
cgaattaaggaggatgctggcatgaaaactgcgaagctaaaagatgaaaaagaggtcttg
gacaggcaacatcatgtcaatattgaagctctaaagaatttagaagaaaatcttcagcag
ttgaaaaatcgtagtagtgaacttgatactcaggaggaacaaatgaaaaaaaggctgaaa
aaaattgatgattcgtcctcaaaacataagagtgatctcactgcacagaagaaggaactg
cgttcgatgcatgataaacatcaggatgccagatataaatatgaaaatttaaagtcaaag
atcagcgaagtagaaaaccaactacgtgaactaaaggctgatagacatgagactgaaagg
gatgccaagttgtctcaggcagttgaggctctaaaacgtctgtttcaaggtgtccatggt
cgtatgactgatctttgtcggccaacacagaaaaagtttaatctcgctgttactgttgct
atgggtagattcatggacgcagttgtagttgatgatgaacaaactggaaaggaatgcatt
aagtacttgaaggagcaaaggcttcctccgcagacatttatcccacttcactctattcgt
gtaaagccagtcattgagagactacggaccttgggtggaacagcacggctggtctttgat
gtgatccaatttgatcctgcgttggagaaggcaattgtttatgctgttgggaatacactt
gtttgtgatggccttgaggaggctaaagttttaagctggacgggtgagaggtacaaagtt
gtgactgttgatgggatacttctcactaaagctggcacgatgactggtggtaccagtggt
ggaatggaagcgaggtcaaaacaatgggatgacaaaaaaattgagggactgaagaaaaag
aaagaacagtttgagtcagagttggaggagcttgggtcaataagagagatgcaactaaaa
gagtctgaagcttcagggagaatcagtggacttgaaaagaagatccaatatgcagagatt
gagaagagaagcattgaggacaagcttgctaatttgaagaaggagaaacaaaatattaaa
gaagaaattgatcgtatcactcctgagcttcttaagactaaagaagctattgataagcgt
agtgcagaaattggtaaactggagaggaggatcaatgaaattgttgaccgaatatacaga
gattttagtaagtctgttggggtggcaaatatacgtgagtatgaagagaaccagcttaag
gatgctcaaaataatgccgaggaaaggcttagcttgagtagtcagctctcaaagttgaaa
tatcagttggagtatgaacaaaatcgagacatggaatcacgaatcaacgagcttgaatct
tctctcagtgcattagaaaatgatttagagcggattcaagaaagagaaactgcagccaag
ttatctgcggaaaaagatattagtgatatcaaaaacttgaataatgaagtagaagaatgg
aaatcaaagtctgaagagtgtgagaaggaaatacaggaatggaaaaagaaagcttctgca
gctaccacagccatttctaaacataatcgtcagataaattcaaaggagaatcagattgag
cagcttatagcgaagaagcaggaaattatagagaaatgtgaactagaacatattagcctt
ccagtagtcgaagaccccatggataccgaaacgtcaacgccaggcccagctttcgatttc
agtcagttgaatagaacatatgtgcaggataagagggccgctgaacgggaaaagcttgat
tcagaatttaagcataaaatagattccatggtatcagaaattgagagaacagctccaaat
ttgaaggccctcgaccaatacgaagctctaaaagagaaagaaagagctgtaaatgaagag
tttgaagcagccaggaaagaggaaaaggaaatagcagataaatttaacgctgtcaagttg
gagaggaatgagaagttcatggctgctttcagacatattgagggtattattgataagata
tacaaacagcttacaaaaagcaacacacatccattgggcggaacggcttatttgaactta
gacaacgaagatgatccgttcttaagcggcaccaagtatacagttatgccgccaacaaag
cgttttcgtgatatggaacaactgtctggtggagagaaaacagttgcagctcttgctttg
ctcttttccatccacagttttaggccttccccatttttcatactggacgaagtcgatgct
gctctcgataacttaaacgttgccaaggttgccggattcatccgttccaagtcatgcgaa
ggagccagaaccagcgaggatcccgatataggcaacggtttccagagtatcgtgatttct
ctaaaagatagcttctacgataaggccgaggctttggtcggagtataccgggactccgaa
aggggctgctctagaacgttgacatttgaccttaccaagtatcgggagtaa
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