Cannabis sativa (hemp): 115722191
Help
Entry
115722191 CDS
T08987
Name
(RefSeq) pre-mRNA splicing factor SR-like 1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115722191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csav03041
]
115722191
Spliceosome [BR:
csav03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115722191
Complex C
U4/U6.U5 tri-SnRNP related factors
115722191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
115722191
NCBI-ProteinID:
XP_030507186
LinkDB
All DBs
Position
9:complement(44158060..44166330)
Genome browser
AA seq
440 aa
AA seq
DB search
MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYAADPKTLWNWFEPYVK
DEEEFSPGSSGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPVMRQVTANLDKMNLPSKHSG
VTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPYDRSSTD
DVRSRRSQSREYLDREHHRDRDNERDRNRDRDRERDRDRDRDRYKERERDRNKERDRERD
RERYRDRDRDRDRDRVRDREREGVRESSYDYDRRSRYGEREGRKDYEKSDRDGSRHYRSR
SRSRSRSRSRSHSLQAAAVPYSSPQRDASKERTSASSNLAKLRNMYGDLGSQKGDDSTDR
ATGSSNGGEEVIRLGGSSWK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggaaatacaaacttgtgggaagcccatagactcattgctggagaaggtgctttgtatg
aacattttatcttctgattatttcaaagagctttaccggttgaagacttaccatgaagtc
atcgacgaaatctacaatcaagtggatcatgtcgagccttggatgaccggaaattgccgt
ggtccttccaccgccttttgccttctctacaagtttttcactatgaaactcactgtcaag
cagatgcacggactcttgaagcacactgattccccctacataagagcggttggattcctc
tatttgaggtatgctgcagatccgaagactctgtggaattggtttgaaccatatgtcaaa
gacgaagaggaattctctcctggatccagtggacgaatgaccacaatgggtgcatatgtg
cgtgatttgcttcttggacaatattacttcgacactctctttccgcgaattcctgttcca
gtaatgcgccaggttactgctaatcttgataagatgaatcttccatccaagcattcaggc
gtgacaggagataccactcggcatggatctgatgatactgctcgacgtcctccatctgtg
aaagctgctctttccgtctcatttggtcagcgtgctcctcatcgtgcgtcaactagagat
tcctcacctgttcgtcgcactcttccaccacctcctccttatgacagatccagcactgat
gatgtacgaagccgacgcagccagagtcgtgaatatttggacagagagcatcatcgtgac
agggacaatgaaagggaccgcaatagagacagagacagggagcgtgatcgtgacagggac
cgagataggtacaaggagagggagcgtgatcgtaacaaggaaagagacagggaaagggat
agagaaagatacagagatagggatagggatagggatagagacagggtcagggacagagaa
cgggaaggggttagagaatccagttatgattatgatcgtaggtctagatatggagaaaga
gaaggccgaaaggactatgagaaaagcgaccgtgatggtagcagacattatcgcagtcga
agccggagccgcagtcgaagccggagtagaagtcatagcttgcaagctgcagctgtgcct
tattcaagcccgcagagagatgcgagcaaggaaaggacatcagcatctagcaacctagca
aagcttaggaatatgtacggtgatttaggtagtcaaaaaggagatgatagtacagacagg
gctactggaagcagcaatggtggcgaagaggttattagacttggtggttcttcttggaag
taa
DBGET
integrated database retrieval system
