Cannabis sativa (hemp): 115722724
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Entry
115722724 CDS
T08987
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
csav
Cannabis sativa (hemp)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
Lactamase_B_2
UBA_4
Motif
Other DBs
NCBI-GeneID:
115722724
NCBI-ProteinID:
XP_030507869
LinkDB
All DBs
Position
9:16643433..16653998
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AA seq
1429 aa
AA seq
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MASTSTEALTLSSSHLFLTAQKSFHHHPSPPPFSLSPFPSSFPQSKRIPKTRFLVDAFRH
AGDHSISYFLSHFHSDHYTGLSPNWSKGIVFCSQITARFLVQVLKVPSVFVFPLPLRESV
IVDGSEIVLIDANHCPGAVQFLFKIPTTDGNFERYVHTGDFRFCHSMKSDTILREFVGPD
SVFLDTTYCNPKFIFPSQEESIEYIVSVIERVTSESKGSVKDVLFLVATYVIGKEKILLE
IARKCNRKIYVDAKKMAVLRVLGCEESEVFTEEESESDVHVVGWNVLGETWPYFRPNFLK
IKEIMVERGYSKAIGFVPTGWTYEVKRNKFSVRSKDSFDIHLVPYSEHSNYEELREYVRL
LKPKRVIPTVGLDVEKLDGEHANKMKKHFAGLVDEMANKQDFLKGFHRGYCEVSDKDGKD
TNNAPTKELHLDKKTASSVLEVNENNDTCFGSESSLPLQESDSQKLMVLSDAEVEKTLQE
LRDCLPSWVTRDQMLNLIATSSRDIVQAVSTFYEHETEFHEQAHACSTSNSTSQINIPND
SAPLLQTTTKNHSPSGKIGIPSSQDFKVVNIKQILSGVSLSPGKKKNIENKKNKKVNLKA
KSEISGLFSSASPGKRKKNIENKPNKKLKLKSKSKLETSGSKQPTITRFFSKVLDSGSQS
ADTTLHDKITEDENLSSDGTKQYKKEIDQFIKIINTNESFRSYAASIVEKTKGDINMALD
IYYNNPEGAHGGGEVDVGTSKSSQFQCSILSSFSGQKKLSTENVGHKAEYSTPGLLMDNA
STTSVSLSPEKYNPTEHACWRDGQRAPYLHLARTFELLESEKGKIKATSMLCNMFRSLLA
LSPEDVLPAVYLCTNKIAADHENKELNIGGSLVTSALEEACGTSRSKLREMYNDLGDLGD
VAQACRQTQTLLAPPAPLLIKDLFSTLQKISVQTGSGSTLRKKNLIVNLMRSCREKEMKF
LVRTLIKNLRIGAMMRTVLPALAQAVVMNSSPHESTKDELQSLSGAVVEAYNVVPSLDLI
IPSLMNNGIGFSSSTMSMIPGIPIKPMLAKITNGVPQAMKLFQNKAFTCEYKYDGQRAQI
HKLPDGSFRVYSRNGDESTSRFPDVIDIMMKSCKPDAVTFILDAEIVAIDRKNGCKLLSF
QELSSRGRGSKDISITLDSIKVDICVFVFDVMFSNGQPLLTIPLRQRRKYLKDLFLGEKL
GYLQYANEMTVEQDDTSLRSESTLTKISSFLESALLSSCEGIMVKSLDVDAGYSPSKRAD
TWLKVKRDYVDGLNDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPDTGEFQSVCRVMSGF
SDSFYAEMKSFFSEEKILSKKPSYYRTAEVPDMWFSPELVWEIRGADFTVSPVHEAAFGL
VHPSRGISIRFPRFIGSVSDRNPEECSTAADIAEMFHSQTRKMDVMAED
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacttccaccgaagccctaactctctcctcttcccacctctttctcaccgcc
caaaagtccttccaccaccatccctccccacctccattctccctctctcctttcccctca
tctttcccacaatccaaacgtattcccaagactcgttttctcgtcgacgccttccgccac
gccggcgaccactccatttcttacttcctctcacattttcactccgaccactacaccggc
ctctcccccaattggtctaagggaatcgtcttctgctcccaaatcactgctcgctttctc
gttcaagtactcaaggtaccttctgtttttgttttcccattgcctcttcgtgaatctgta
atcgttgatgggagtgagattgtacttattgatgcgaatcattgccctggtgctgtacaa
ttcctgtttaagattccgactacagacggaaattttgaaagatatgttcatacaggagat
ttccgcttctgtcattcaatgaagtcggacaccattttacgagaatttgttggtccggat
tctgtgttcttggacaccacttattgtaacccgaaatttatttttccatcgcaagaagag
tctattgagtatattgttagtgtgatagaaagggttactagtgaaagcaaaggttccgtg
aaagatgtattatttcttgtagctacatatgttatcgggaaagagaagattttgcttgaa
attgcgcgtaaatgtaatcgtaagatatacgtggatgctaagaaaatggctgttttgcga
gttttgggctgtgaggaaagtgaagtttttactgaggaagaatctgaaagtgatgtacat
gttgttggttggaacgtgttaggtgagacatggccatattttaggccgaattttcttaaa
attaaggaaattatggttgagagagggtactctaaggccattggatttgttcccactgga
tggacatatgaagtgaagcgtaacaaattttctgttaggtctaaagattcatttgatatt
catcttgtaccatatagtgagcattctaattatgaggagctcagagaatatgttaggctt
ttgaaaccaaagcgtgttattcctacagttggcttggatgttgaaaagcttgatggcgag
catgctaataagatgaaaaagcattttgctggattagttgatgaaatggccaacaaacaa
gatttcttaaagggttttcatcgagggtattgtgaagtgagtgataaagatgggaaggac
accaacaatgctccaaccaaagaattgcacttggacaaaaagacagcgtcctctgtgttg
gaagttaatgaaaataatgatacttgttttggttctgaatcatcactcccactgcaagaa
tctgattcacaaaaactaatggtgttaagtgatgcggaagtggagaaaacccttcaggaa
cttcgtgattgtttaccctcgtgggttacacgagaccagatgttgaatcttattgcaacc
tctagtagggacattgttcaagcagtttccaccttctatgagcatgagacagaattccat
gaacaagcccatgcttgttcaacttctaattctacttcccagatcaacataccaaatgac
tctgcaccccttttgcaaacaaccactaaaaatcatagtccgtctgggaagattggtatt
ccttcaagtcaagattttaaggttgttaacataaagcaaatactaagtggcgtttcactt
tctccaggaaagaagaagaatattgaaaataagaaaaacaagaaagtaaacttgaaggct
aagtcggaaataagcggattgtttagcagtgcttctcctgggaaaaggaaaaagaatatt
gagaacaagccaaacaagaaattgaaattgaagtctaagtctaagctagaaacaagtgga
tcaaaacaaccaacaataacaaggttctttagtaaagttttggatagtggttctcaaagt
gctgatacaaccttgcatgataaaatcactgaagatgaaaatttgtctagtgatggcacc
aaacaatacaagaaagagatagatcaatttattaagataataaatacaaatgaatcgttc
agaagctatgctgcctcaatagtggagaagacaaagggagatattaatatggctcttgat
atttattacaataatccagagggtgcacatggtgggggtgaagttgatgtgggcactagc
aaaagttcacaattccagtgcagcattctcagcagtttttctggccagaagaaactttcg
acagaaaatgtggggcataaagctgaatactcgacaccgggattgttaatggacaatgca
agcacaacatctgtatcactatctcccgaaaaatacaatcccacagagcatgcttgttgg
cgggatggacagcgggctccatatttacatcttgcacgaacttttgaactgcttgagagt
gaaaaaggaaagataaaggctacttctatgctctgcaatatgttcagaagtttgctcgcc
ttgtcccccgaggatgtgctgcctgcagtgtatttatgcacaaataagattgctgctgac
catgaaaataaggagctaaatattggaggtagtttggtaacatcagcactggaagaggca
tgtgggacaagccggtcaaaattaagggagatgtacaatgacttgggtgatctaggtgat
gttgctcaagcatgccgtcaaacacagacattacttgctccacctgcaccacttctgata
aaagacttattttctactttacaaaagataagtgtacaaacaggcagtggaagtacatta
aggaagaagaacctaatcgtcaatctcatgcgttcttgtagagagaaggaaatgaagttt
ctggttagaactttgattaaaaatttacgcattggagctatgatgaggactgttctccct
gcactagctcaagcagttgttatgaattcttctccccatgaaagcacaaaggatgagctt
cagagcctttcaggagctgttgttgaagcatacaatgtggttcctagtttggacttaatt
atcccctctctaatgaacaatgggattgggttttcatcatctactatgtcaatgattcca
ggaatacctattaagccaatgcttgcaaaaatcaccaatggtgttccacaagcaatgaag
ctctttcaaaataaggcttttacttgtgaatacaaatatgatggtcaacgtgcacaaatt
cacaagctacctgatggatcctttcgtgtgtattcacgaaatggggatgaatcaacgtca
agattcccagatgttattgatataatgatgaaatcttgtaagcctgatgcagttaccttt
atacttgatgcagagattgttgcaattgatagaaagaatggttgcaaactcttgtcattt
caagagctgtcttcccgtgggagaggcagcaaggatatctcaattacattggacagcata
aaggttgacatttgcgtatttgtctttgatgtcatgttttcgaatggacagccgttgtta
actattccattacgccaaagacgaaaatacttgaaagatttatttttgggtgagaagttg
ggatatcttcaatatgcaaatgaaatgacagttgagcaagatgatacttctttaagaagt
gaaagcactttaactaagataagttcttttcttgaaagtgcactcctatcctcttgtgaa
ggaattatggtaaaatctctggatgttgatgctggatattctccatcaaagcgtgctgac
acatggctcaaggtcaagcgagattatgttgatggactgaatgactcacttgatttagtc
ccgattggcgcttggcatgggaatggaagaaaggcaggatggtacagtccttttctcatg
gcatgttacaatcctgatactggagaatttcagagtgtttgccgtgtcatgtctgggttc
tctgattccttctacgcagagatgaaaagtttcttttccgaggaaaagatcttgtccaaa
aagccatcttactatcgaactgctgaggtgcctgatatgtggttctctccagaactcgtg
tgggagataagaggtgctgattttacagtgtcccctgttcatgaagctgcctttggtcta
gttcatccatcacgtggcatttctatcagattcccgagatttattggctctgtctctgat
agaaatcctgaagaatgtagcacagctgcagatatagctgagatgtttcattcgcagact
cggaaaatggatgtgatggcggaagattaa
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integrated database retrieval system
