Clostridium saccharobutylicum: CLSA_c27330
Help
Entry
CLSA_c27330 CDS
T02876
Symbol
spoVD
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
csb
Clostridium saccharobutylicum
Pathway
csb00550
Peptidoglycan biosynthesis
csb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLSA_c27330 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csb01011
]
CLSA_c27330 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
csb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CLSA_c27330 (spoVD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
YonK
Motif
Other DBs
NCBI-ProteinID:
AGX43704
UniProt:
U5MSB5
LinkDB
All DBs
Position
complement(3055746..3058016)
Genome browser
AA seq
756 aa
AA seq
DB search
MGEEKLKKKNNKDRAKMRRRMSAIVFALTFVFAILTIRLSYIMIVKRADYAARAEEQWTS
EVKIDAIRGRILDTNGKELAVSANVYRVDFDLNSIRAYFDLTKLSKDEIEHLKGIGISIS
ADQTKLSTSDIAPLIAKALNLDVAEVQKKLDTKLPSGAAAGSATLVRRIEKEQADKVKEL
KIHGVIVSPDTKRYYPNNNFLAHVLGSTNIDGKGLTGVELQYNSYLAGVPGMKIAELDKN
NRDLPYTISQFTSPVNGKDVTLTIDENIQNFAEKIAQQAYEDNKAKAVSILVMDPKTGEV
LAMVNKPDFDPNNPYDGADKFDGANQSDKLQKMWRNRLVNDTFEPGSIFKVITAITGLEE
NVVNKDTQFVDNGSISVGGITPKCWKPGGHGVQNFPEIIQNSCNVGFVELGQMIGKEKLC
TSIDKFGFGKLSGIDLPGEAKGIVKPVNKVSDADLATIAFGQTNTVNSVQYMAAFNAVAN
GGTLIEPHVMKEVTHTDENDVKIVDDTFKPKTSTVASAEKTAELRSYLERVITGGSGTGT
FIEGYHIGGKTGTAQKVINGRYEDGKYISSFVGMAPVSDPKVTVMVTVDEPSNGAYYAAQ
VAVPYGKPLFTDIFNYLNSKFSDENSNQITRDVVIPEIRGMKLEDAKKALKDAKLDFNID
GAGDTVVSVKPYPGYSVKEGAKINLYTTGDATYNNNVVMPDVRGYSKDDATKLLTSLGIT
PTFDGTGMVIDQDVAEGEVVTKGTSVKLSLKQDYKD
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggaaaaattgaaaaagaaaaataataaagatagagcgaaaatgcgtagaaga
atgagtgctatagtattcgcattaacttttgtttttgcaatattgaccattaggctatct
tacataatgatagtaaaaagggcagattatgctgcaagagcagaagaacaatggacaagt
gaagtaaagatagatgctataaggggaagaattctagatacgaacggaaaagaacttgct
gtatctgcaaatgtatatagagtagattttgatttgaattcaataagagcttacttcgat
ttaacaaaattatcaaaggatgaaattgaacatttaaaaggaatagggatttcaatttca
gcagatcaaacaaaattaagtactagtgatattgctcctttaattgcaaaagctttaaat
ttagatgtagcagaagttcaaaaaaagttagatacaaaacttcctagtggggcagcagca
ggatcggcaactcttgttagaagaatagaaaaagaacaagcagataaagtaaaagagtta
aaaatacatggagttatagtttcaccagatacaaaaaggtactatcctaataataatttc
ttagcccatgttcttggaagtaccaacattgatggtaagggtttgactggcgtagaatta
cagtataattcttatttagcgggtgttcctggaatgaagattgcagaacttgataaaaac
aatagagatttaccttatacaatatctcaatttacatctcctgtaaatggaaaagatgtt
actcttactattgatgaaaatatccaaaattttgctgagaaaatagcacagcaggcttat
gaagataataaggctaaagcagtttcgatattagtaatggatccaaaaactggagaagtt
ttagctatggttaataaaccggattttgatcctaataatccatatgatggtgctgataaa
tttgatggagcaaatcaaagtgataaattacaaaaaatgtggagaaatagattggtaaat
gatacttttgaaccagggtcaatatttaaagtaattacagcgattactggattagaagaa
aatgttgttaataaggatacacagtttgtggacaatggatcgatatcagttggcggaatt
acccctaagtgttggaaaccaggtggacatggagtgcagaatttccctgaaattattcaa
aattcatgtaatgtaggatttgttgaattaggtcaaatgattggtaaagagaaactttgt
acatctattgataaatttggttttggtaaattaagtggaattgacttgcctggtgaagca
aaggggatagttaaaccagttaataaagtttcggatgcagatcttgcaacaatagcattt
ggacaaaccaatacagtaaattcagttcaatatatggctgcctttaatgctgttgctaat
ggaggaactttaattgaacctcatgttatgaaagaagttactcatactgatgaaaatgat
gttaaaatagtagatgatacttttaagcctaagacttccacagtagcgagtgcagagaaa
actgcagaacttagaagttatcttgaaagagttattacaggcggatcaggaactggaaca
tttatagaaggttatcatattggtggtaaaactggtacagctcaaaaagttattaatgga
agatatgaagatggtaagtatatttcttcttttgttggaatggcgccagttagtgatcct
aaggtaactgttatggtaactgttgatgaacctagtaatggtgcatattatgcagctcaa
gtagcagtaccatatggaaaaccattatttacagatatttttaattatttaaatagtaaa
ttctcagatgaaaactcaaatcaaattactagagatgtggtaattccagaaattagagga
atgaaattagaagatgctaagaaggcattgaaggatgcaaaattagattttaatatagat
ggagcaggagatacagttgtttctgtaaaaccatatccaggttattcagtaaaagaaggt
gcaaaaataaatctttacacaacaggggatgcgacttataataataatgttgtaatgcca
gatgttagaggatattccaaggatgatgcgacaaagttattaacaagtttaggtataaca
cctacatttgatggaactggaatggtaatagaccaggatgttgcagaaggtgaagtggta
acaaaaggaacatcagtcaagttgagtttgaaacaagactataaagactag
DBGET
integrated database retrieval system
