Citrobacter sedlakii: JY391_04395
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Entry
JY391_04395 CDS
T07832
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
csed
Citrobacter sedlakii
Pathway
csed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JY391_04395 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csed03400
]
JY391_04395 (recD)
Enzymes [BR:
csed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JY391_04395 (recD)
DNA repair and recombination proteins [BR:
csed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JY391_04395 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
Helicase_RecD
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
MukB
AAA_28
DEAD
T2SSE
UvrD_C
Herpes_Helicase
Acetyltransf_6
CbiA
DO-GTPase1
ATPase
Motif
Other DBs
NCBI-ProteinID:
QUC31012
LinkDB
All DBs
Position
924412..926238
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AA seq
608 aa
AA seq
DB search
MTLQERLLDAVEQKQLRPLDAQFALAVTGENEPAVTLAAALLSRDAGEGHVCLPLARLTQ
KDDLPPVLAACLSEIGEPADWRECLLASSAVSRGEHPSPMILYGERLYLNRMWCNERTVA
RFFSEVNQPIAVDEALLSQTLEALFPDADDINWQKVAAAVALTRRISVISGGPGTGKTTT
VARLLAALIQLADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEEASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPPHGRVIFLGDRDQ
LASVEAGAVLGDICAYVNAGYTPERAQQLTRLTGMPVPAGTGTEAASLRDSLCLLQKSYR
FGSHSGIGQLAAAINRGDKAAINTVFQQDFADIEKRILQSGEDYSAMLDDALRGYGRYLQ
LLSQRAEPDAIIEAFNEFQLLCALREGPFGVSGLNERLEQAMQQKRKIRRLPHSRWYEGR
PVMIARNDSALGLFNGDIGIALERGDGLRVWFAMPDGSIKDIQPSRLPEHETTWAMTVHK
SQGSEFDHAALVLPTQRSPVVTRELVYTAVTRARQRLSLYADERILSSAVATRTERRSGL
SALFNGEG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgacgttacaggagcgactgctcgacgctgtggaacaaaaacagcttcgcccgctggac
gcgcagtttgcgctggcggtaactggcgagaatgagcctgccgtgacgctggcggcggcg
ctgttgagtcgggacgccggagaggggcacgtctgtttaccgcttgcgcgcctgacgcag
aaggatgatctgccaccggtgctggccgcctgcctgagtgagatcggcgagccagcagac
tggcgtgaatgtctgctggcctccagcgcggtcagccgcggcgagcatccctcgccgatg
attctctacggcgaacgtttgtatctgaatcgcatgtggtgtaacgaacggacggtagcg
cggttctttagcgaagtaaatcagcccattgcggtggatgaagccctgttgtcgcaaacg
ctggaagcgctatttccggacgctgatgacattaactggcaaaaagtggcggcggcggtc
gcgctgacccggcggatttcggtgatttccggcgggccggggacgggaaaaaccacaacc
gtggcgcgactgctggcggcgttaattcaactggcggacggcgagcgatgccgcatccgg
ttggcggcgccgacgggcaaagcggcagcgcggctgaccgaatcattaggcaaggccctg
cgccagcttccgctgacagacgaacagaaaaaacgcattcctgaagaggccagcacgctg
caccggctgttgggcgcccaaccgggcagtcagcgcttgcgccatcacgcgggtaacccg
ttgcatctggacgtgctggtggttgatgaagcgtccatgattgacctgccgatgatgtcg
cgcctgattgacgcgttgccgccgcatgggcgggtgattttcctcggcgatcgcgaccag
ctggcgtcggtagaagcaggggcggtgctcggtgatatctgcgcgtatgtgaacgcgggt
tatacgccggagcgggcgcaacagttgacccgcctgaccggtatgcccgtcccggcaggt
accggtactgaagccgcttccctgcgggacagcctgtgtctgttgcaaaaaagctatcgc
tttggcagccattccggcattggccaactggcggcggcgatcaaccggggcgataaggcg
gcgataaacaccgtctttcagcaggattttgcagatattgagaaacggatattgcagagc
ggggaagactacagcgctatgcttgatgacgcgctgcgcggctacggacgctatctgcaa
ctgctttcacagcgtgcggaaccagacgcaatcattgaggctttcaatgaattccagttg
ctctgcgcgctccgtgaagggccgtttggcgtcagcggactgaatgaacgtcttgagcag
gctatgcagcagaaacggaaaattcgccgtctgccgcattcccgttggtatgaagggcgg
ccagttatgattgcccgcaacgacagcgcgctggggctgtttaacggcgatattggcatt
gcgcttgagcgcggggacggcttacgggtttggttcgcgatgccggacggcagcatcaaa
gacatacagcccagccgcctgccggagcatgaaacaacgtgggcaatgacggtgcataaa
tcgcagggatcggagttcgaccatgcggcgctggtgttgcccacccagcgctcgccggtg
gtgacccgcgaactggtgtacactgctgtaacccgcgcgcgccagcggctatcgctgtat
gccgatgagcgcattctgagcagcgcggtggccacccgcaccgaacgccgaagcggtttg
tccgcgttgttcaatggcgaaggctaa
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