Cynoglossus semilaevis (tongue sole): 103378072
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Entry
103378072 CDS
T04866
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103378072 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103378072 (scarf1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csem04990
]
103378072 (scarf1)
Membrane trafficking [BR:
csem04131
]
Endocytosis
Phagocytosis
Scavenger receptors
103378072 (scarf1)
Domain-containing proteins not elsewhere classified [BR:
csem04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
103378072 (scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
103378072
NCBI-ProteinID:
XP_016887745
LinkDB
All DBs
Position
4:complement(11030196..11036594)
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AA seq
907 aa
AA seq
DB search
MILLLRALSLLLCCFMTTAHTLDPDGRNVCYNARDPSSPVCCTGWLQQGAECTIPVCEGE
QACQKDEICVYPGVCRCPPGYYGAHCKTRCPPDFWSSDCRQVCRCHPNGRCDPVTGECTC
HPNRWGPLCQNTCKCTRHGHCHPVHGNCTCDQGWWTPTCSKPCQCASGTAVGPGCEQARC
RCQRGHSGLKCSFACNCFLLACNQWTGACECEPGWWGSACDRRCNCDLTHSSCDPGSGQC
LCHPGYQSRFCNKSCDSGTYGSGCRMRCGHCKNNQVCSATDGSCAACQPGWNGTGCDRPC
PYGHYGNGCQEKCPRCRENETCDPQNGRCLRCDPGWTGIRCEETCPDRTFGDSCSFLCNP
CVHGNCHHVTGRCVCEPGFWGESCNSSCPAPQFGLNCSSVCDCGEGVNCHPVTGACPSSS
TGAVLVAVLVPLLLLLLAVLCCCLCCGGRPAEAKDRASLADGGVLVRMKYHVYSVLANIS
ASLPCISNWSSGLPRVTVSHHDPELTFNHSFIEPPSSGWVTEGSSFDSDEEEGEALYCVP
PREDIPAVGGGEFQEMSSKCNIFLDPNGFSSEDITSPFNIPRTSSIAKSKRPSVSFAEGT
RFSPMERRGSAQDAGALARGKPKSGWGIAMLSALQNQGSATTAGQEDEGEATEMENNVDA
TEVQETSCETGDQDPDQTPSRTTVQVAGAAGRRRTMSNTAAQKGNVLTTPGADAQVNMSK
KVTTVYVTVGKAGRPVTQTNSEGPVQAMLRRLGSLQRQKEQESCRNKTRGGEVVTKPPRR
KLGARASVWEQGGTQGGQPAGETAVCKPLRRKHESHVSSDTVNSNESPVPESGAPKRPLS
SILTSVPELASADSGSVLIAQESTGGTESNYLTVGPTGENADIIANAGAVVSGTDEPCYE
NVMIHQS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgctgctcagagctctgagcctcctgctctgctgcttcatgacaacagcacac
acactggatcctgatgggaggaacgtctgctacaatgccagagacccctcctctcctgtt
tgttgtactggatggcttcagcagggggcagagtgcaccatacctgtgtgtgagggtgaa
caggcctgtcagaaagatgagatctgtgtctatcctggtgtgtgtcgctgtccgcccggt
tactatggagctcattgtaaaacacgctgtcccccagacttctggtcctcggactgccgt
caggtgtgtcgctgtcaccccaacggccgctgcgaccccgtcacaggtgaatgcacctgc
caccccaaccgctggggccccctgtgtcagaacacctgcaagtgcacccgccacggccac
tgccacccagtgcacggtaactgcacctgcgaccaaggctggtggacgcccacctgctcc
aagccgtgccagtgcgccagcgggaccgccgtgggccccggctgtgagcaggcgcggtgt
cggtgccaaagaggacactcggggctgaagtgttccttcgcctgtaactgcttcctgttg
gcctgtaaccagtggacaggcgcctgtgagtgtgagccagggtggtggggatccgcctgt
gaccgcaggtgtaactgtgacctgacccacagcagctgtgacccaggcagcgggcagtgt
ctgtgccacccgggctaccagagtcgcttctgtaacaagtcctgtgactcgggaacgtat
ggaagtggctgtagaatgcgttgtggacactgcaaaaacaaccaggtctgctctgctact
gatggatcctgtgccgcctgtcagcccggctggaatgggactgggtgtgaccggccctgt
ccatatggtcactacggcaacggatgtcaggagaagtgtccacgatgcagggagaacgag
acatgtgacccgcaaaatggccggtgtttacgttgtgacccgggatggactggaatcagg
tgtgaggaaacctgccccgaccggacatttggggacagctgcagtttcctgtgtaaccct
tgtgtccatggtaactgccatcatgtgacaggaagatgtgtgtgtgagccaggtttttgg
ggagagagctgtaacagcagctgccccgccccgcagtttggcctcaactgttcctctgtg
tgtgactgtggtgaaggcgtcaactgccacccagtgactggagcctgtcccagcagttcc
acaggtgctgtgttggttgctgtgctggttcctctgctcctcttgttgttggctgtgctc
tgctgctgtttgtgttgtggagggcggcctgctgaagccaaagacagagcgagcttggct
gatggtggtgtgttggttcggatgaagtatcacgtctacagtgtcctggccaacatcagc
gcttctctgccgtgtatctccaactggtcctctggtctgcctcgtgtcactgtgtctcac
catgaccccgagctgaccttcaaccacagcttcattgagcctccatcttcagggtgggtg
acggagggctcgtctttcgacagtgatgaagaggagggggaagccctctactgtgtacct
ccgagggaggacatcccagcagtgggaggtggtgagttccaggagatgagttccaagtgt
aacatcttcttagaccctaatggcttcagtagtgaggacatcacctccccctttaacatt
cctcgcacgtccagcatcgccaagtccaaacgtccatccgtctcctttgctgaggggacc
cgcttcagccccatggagagacgaggctctgctcaggacgcgggggctctggcacgcggc
aaacctaaatctggctggggtatcgcgatgctttctgcccttcagaatcagggaagtgcc
accacagctgggcaggaggacgaaggagaagccacagagatggagaataacgtagatgca
acagaagtccaggaaacgagctgcgaaacaggagaccaggacccggaccaaactccttcc
agaaccaccgtgcaggtggcgggtgctgcaggaaggagacgcacaatgtccaacacagcc
gcacagaaagggaacgtgctgacgacacctggtgctgacgctcaggtcaatatgtccaaa
aaggtcaccacggtgtacgtgacggtgggtaaagcaggcagacctgtgacacagaccaac
tctgaaggtccagtccaggccatgctcagaagactgggcagcctgcagagacagaaggag
caggaatcatgtaggaacaagaccagaggaggtgaggtggtcaccaaaccgccaaggagg
aagcttggcgctcgggcaagtgtatgggagcaggggggcacccaggggggccagccagcg
ggggagactgctgtttgtaaacccctgaggcggaaacatgagtctcatgtctcctcggac
acagtgaactctaacgaaagtcccgtcccagagagcggcgctccgaaacggccgctgtcg
tccattctgacgagcgtgcctgagctggcttcggctgactcggggtcagttttgatcgcc
caggagagcacaggtggaactgagagcaactacctgacagtgggaccgacgggagaaaac
gcagacatcatcgccaacgcaggagccgtggtcagtgggaccgatgaaccctgctatgaa
aacgtcatgattcaccagtcgtaa
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