Cynoglossus semilaevis (tongue sole): 103378238
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Entry
103378238 CDS
T04866
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03030
DNA replication
csem03420
Nucleotide excision repair
csem03430
Mismatch repair
csem03440
Homologous recombination
csem03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103378238 (rpa1)
03420 Nucleotide excision repair
103378238 (rpa1)
03430 Mismatch repair
103378238 (rpa1)
03440 Homologous recombination
103378238 (rpa1)
03460 Fanconi anemia pathway
103378238 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csem03000
]
103378238 (rpa1)
03032 DNA replication proteins [BR:
csem03032
]
103378238 (rpa1)
03400 DNA repair and recombination proteins [BR:
csem03400
]
103378238 (rpa1)
Transcription factors [BR:
csem03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103378238 (rpa1)
DNA replication proteins [BR:
csem03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103378238 (rpa1)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103378238 (rpa1)
MMR (mismatch excision repair)
103378238 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
103378238 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
103378238
NCBI-ProteinID:
XP_008307599
UniProt:
A0A3P8VYZ8
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Position
4:complement(13997650..14005279)
Genome browser
AA seq
607 aa
AA seq
DB search
MTKLSEGAIEALASGNPFSDPVLQLVNIRRIDSGSGPARFRVMMSDGKHTLSSFMLSTQL
NQMAEDNILVPNCLCVLKRHVTNTLKDGRRVVIILEINVVKPAEDVGGKLGDPVPYSEGQ
SRGPAQSAPLSAPVPESRTPLQPQNRNEVVNKGGFNKEFRKNAPSSVCSTPGVGSKVAPI
ASLNPYQSKWTVRARVTNKSSIRTWSNSRGDGKLFSMELVDESGEIRVTGFNQEVDKFYT
LVEVSKVYYISKASLKIANKQYTSVKNDYEMTLNGESTIIPCEDNCDVPMMQYDFVTIGD
LENREKDATVDVIGVCKSVDEVTRLTTKTNREVSKRTLALMDMSGKVVNVTLWGEEAEQF
DGTGQPVLAIKAAKLSDFGGRSLSASFSSTLVVNPDIPEAYKLRSCYDKEGHAMEAHSLT
EVRGAGGGGYINWKMLSDIKTEHLGHGEKADYFTCLATIVYLRKENCLYQACPSQDCNKK
VVDQQNGMYRCEKCDKDFPNFKYRLILSVNVADHGDSQWMTCFQETAEAILGQNAAYLGQ
LKDSNEAAYDDIFQMANFSTFIFRSRVKLETYNDESKIKATVMEVKPVDHKEYSKRLIMN
IRKLAAQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagctgtcagagggagccatagaggctctggcgtctgggaacccttttagtgat
cctgttctccagctggtgaatatccgcaggattgacagtggcagtgggcccgctcgtttc
cgtgtaatgatgagtgatgggaagcacactctgtcctccttcatgctctccacacagctg
aaccaaatggctgaggacaacatcctggttcctaactgtttgtgtgttctgaagagacac
gtgaccaatacactgaaggacggacggcgtgtggtcatcattttggaaataaatgtggtc
aaacctgctgaagacgttggtgggaagcttggtgacccagttccttactctgaaggtcag
agtcgaggtccagcacagtctgctcccctgtcggccccagtgccagagagtcggactccg
cttcagccacagaaccgaaatgaagtggtgaacaaaggaggcttcaacaaagaatttcga
aaaaatgctccgtcttctgtgtgttcaacacccggggttgggtccaaggtggcgcccata
gccagcctcaacccttatcagtccaagtggaccgtccgcgcacgtgtcactaacaagagc
agtatccgcacatggagcaactcccgtggagacgggaaactcttctctatggagttggtg
gacgaaagtggagagatccgcgtgactggcttcaaccaggaggtggataagttctacacc
ctcgtggaggtcagcaaggtgtactacatctcaaaggcctcactgaagatcgctaacaaa
cagtacacgtctgtgaagaacgactatgagatgacgctgaatggagaatccaccatcatt
ccatgtgaagacaactgtgacgttcccatgatgcaatacgactttgttacaatcggcgac
ttggagaacagagagaaagacgccactgttgatgttattggagtttgcaagagtgtggat
gaggtgacccgcctgacgaccaaaacaaacagagaggtgtccaagaggaccctcgctctg
atggacatgtcagggaaggtggtgaacgtcacattatggggcgaggaagcggagcagttt
gacggcactggtcagcctgttttggccatcaaggcagcgaagctctccgactttggaggg
cgctccctctctgcgtccttcagcagtaccttggtggtcaacccagacattcctgaggcc
tacaagctcagaagctgctatgacaaagaaggacatgctatggaggctcattctttgact
gaggtcagaggtgctggtggtggtggatacataaactggaaaatgctctctgacatcaaa
actgagcatctgggacatggagagaaggcggactatttcacctgcctagctaccatcgtg
tacctgcgaaaagagaactgtctgtaccaggcctgtccaagtcaagattgcaacaaaaaa
gtggtggaccaacagaacggcatgtaccgatgtgagaaatgcgacaaagacttccccaac
ttcaagtaccgcctcattttgtctgtcaacgtggcagatcatggtgacagtcagtggatg
acctgttttcaggaaactgcagaggctatacttggtcagaacgcagcttatcttggacag
ctcaaagactcgaatgaagcagcctatgacgacatctttcaaatggcaaacttcagcacc
tttatctttcgcagcagagtgaagctagaaacctataatgacgaatccaaaatcaaggca
acagtaatggaggtgaagcctgtggaccacaaagagtacagcaagaggctgattatgaac
ataagaaaactggctgctcagtaa
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integrated database retrieval system
