Cynoglossus semilaevis (tongue sole): 103381665
Help
Entry
103381665 CDS
T04866
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csem03016
]
103381665 (trub1)
Enzymes [BR:
csem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
103381665 (trub1)
Transfer RNA biogenesis [BR:
csem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103381665 (trub1)
Prokaryotic type
103381665 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
103381665
NCBI-ProteinID:
XP_008312368
UniProt:
A0A3P8VYT6
LinkDB
All DBs
Position
8:4648096..4652052
Genome browser
AA seq
309 aa
AA seq
DB search
MSETNMAVKSTLSKLLSLNGLCAIYKKQGPTSAHVLNEFKETLLKEAGVKNVNPRKRQKH
DLKVGHGGTLDSPASGVLVVGVGKGTKMLSTMLTGSKKYTAVVELGKATDTLDATGKVIL
EKDFDHITRMDIEEKLKAFTGNIMQVPPLYSALKKDGQRMSHLMSTGQKVEPKPARAVTV
YNLTLQEFEPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHMKSLVRTKQSQFTLEEHTL
HEEQWTLENVMRTLQPCPDTEQNEKQSKDKTKKKCDKKSELKCDKNLEEKSEQKSEENLV
KTTKMENTT
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaccaacatggcggtgaagagcacactgtccaaacttctgtctttgaatgga
ctgtgtgctatttataaaaaacaaggaccaacatctgcacacgtcttaaatgaatttaaa
gagactttgcttaaagaagccggtgtaaaaaacgttaacccaagaaagagacagaagcat
gatctaaaggtgggacatggaggaacattggacagtcccgccagtggagttttagttgtt
ggagtaggaaaaggcactaaaatgctcagcaccatgttgactggatcaaagaaatacact
gctgtggtggaactgggtaaagcaacagacacactggatgctactggcaaagtgattctg
gagaaagactttgatcacatcaccagaatggacattgaggaaaagctcaaagcattcact
ggcaacatcatgcaggttccaccactctattctgctctgaaaaaggacggccagcgtatg
tctcacttgatgagcacgggtcaaaaggttgagcccaaacctgccagagcggtcaccgtg
tacaacctgaccctgcaggagtttgagcctcctctcttcactctggatattgagtgtggt
ggaggattttatgtcagaagcctggtagatgacctggggaaagctttgtcatcctgtgct
cacatgaagtcactagtacggaccaaacagagtcagttcactctggaggagcacaccctg
cacgaggagcagtggacactggaaaatgtcatgcgtactctgcagccctgcccggacact
gagcagaatgagaaacagtcaaaagacaaaacaaagaaaaaatgtgacaagaaatcagag
ctaaaatgtgacaagaacttagaggaaaaatctgagcaaaaatctgaggaaaaccttgta
aaaacaaccaaaatggaaaacaccacttga
DBGET
integrated database retrieval system
