Cynoglossus semilaevis (tongue sole): 103381725
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Entry
103381725 CDS
T04866
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103381725 (rnf40)
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103381725 (rnf40)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
103381725 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
SpoIIE
Motif
Other DBs
NCBI-GeneID:
103381725
NCBI-ProteinID:
XP_008312452
UniProt:
A0A3P8VYE6
LinkDB
All DBs
Position
8:5298489..5312028
Genome browser
AA seq
1007 aa
AA seq
DB search
MSGTGGGKRPSGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVMQFKNKK
LSERLEQRQAMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEENVQILRKRIEPQSPV
KSTPAIPMVPVSDPTPMDEDGVSLSSPTSSVPLPPLPEAQHEEERVEKQQEESQEQHQEE
RQEEQQQQQPPLPAGSEETMAPTEPPQESTAETTPPPPPLSENAKGFLTTLEHSSEEELS
LHLQGRMQFSKEAIACLVCVFDRLHSRISDMCKQVQTATCEDDSQSDIISLMHTLLDDNN
RLRDLATVLQGRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDIEKLRNREQKLNK
HLAEAMEQLKSGYSSTGSSGGLPGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQA
ELQEAVRESEKLKMDLRNIPEEVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLLT
AKNAHLRHIEHMESDELSVQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGP
INREMRHLISSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTGVLILEETTSDSM
DVKKEEDEDQEEEEERKKELERQRAREREREAERERERERERERQRSDEMKRKDSDTLKM
LRVELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDEMRMRVRDLEERE
RKESKKLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSR
LLQQLREKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLRFKTQVDAQLLVVQKLEEK
EGVLQSTLATLEKELAVRMQALELNKRKAVEAAQLAEDLKVQLEHTQSKLKEIQVSVAEN
RTARERESSNLKRAQEDLSRLRRKLEKQKKMEVYTDADEILQEEINQYKAKLRCPCCNTR
DKETVLTKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtaccgggggagggaaacgtccctcaggtggagacagtccccctggtccccct
gagaagaaaagcaaaaaagaggagaagactacgaccactctcattgagcccattcgaata
gcaggggtgtcatccactgaggaaatggacatgaaagtaatgcagtttaagaacaaaaag
ctgtctgagagacttgaacagagacaggcgatggaggacgagttacgagagaaaattgag
aagctggagaagagacaagccactgatgacaccactctactaattgtcaaccgttactgg
tcacagttggaagagaatgtgcaaattttacgcaaacgcattgagccccagtctccagta
aaatccaccccggcgatacccatggtccccgtctctgatccaactcctatggatgaagat
ggggtcagtctgtcttcaccaacatcttccgttccccttcctccccttcctgaggcccaa
catgaagaggagcgagtagagaaacagcaagaggaaagtcaggagcagcatcaggaagag
cgccaggaggagcaacagcaacagcagcctcctcttcctgctggatcagaagagacaatg
gcaccaactgagcctcctcaggagtcaaccgcagaaaccacaccacctcctcctcctcta
agtgagaatgccaaagggtttctaaccacactggaacacagcagcgaggaagagctcagc
cttcaccttcaaggtcgcatgcagttcagcaaagaggccatcgcctgtttggtctgcgtg
tttgacaggctgcacagccgaatctctgacatgtgcaaacaagtccaaactgccacatgt
gaggatgacagccagtctgacatcatcagtttaatgcacacacttctggatgacaataac
cgactgagggatctggccaccgtcctgcagggtcgtcatcataaaatgtctatggagtac
aatgagttggtagacaaggtgaccagctctgagaccaaggtctctgagatggagacaaca
gtagaggatctgcagtgggacattgagaaactccgcaacagggaacagaagctcaacaaa
catctggctgaggccatggagcagctgaagtctggatacagcagcactggcagctctggt
ggtctccctggtggtcagattacactgaacattcagaagtttgagagtctcaatgcggaa
ctggagcacaaccaggagttggcaaatagccgcatggcagagttagagaaactgcaggcg
gaactacaggaggctgtgagagaaagcgagaagctcaagatggatttgcgcaacattcca
gaagaggtagtaaaggaaaccttggagtacaaatgtctgcagtctcagttttctctgctg
tacaatgagtctctaggggtcaaaacacaactggatgaggcacgggcgctcctgctcact
gcaaagaacgcccacctccgacatatagaacacatggagagtgatgagttgtctgttcaa
aagaagctgcggactgaagtcattcagctggaagataccttggcccaggtgcgcaaagag
tatgaaatgctgcgcattgagtttgagcagaacctggcagccaatgaacaagcaggacca
atcaacagggagatgcgacacctgatcagcagtctgcagaaccacaacctgcagctcaaa
ggagatgtacagcgttataagaggaagctacgtgaaacccagatggagatcaataagttg
cggtgtcaaagcggtgacacaggggtcctgattctagaggagacgacgagtgacagcatg
gatgtgaagaaagaggaggatgaagatcaggaggaagaggaagagaggaagaaggagctg
gaaaggcaaagagccagggagagagagagggaggctgagcgagagcgggaaagggagaga
gagagggagaggcagcgcagtgatgagatgaagaggaaagactcggacacactgaagatg
ctacgagtggaactcaagaaagcccaggagtcccagaaagagatgaagctcttgttagac
atgtataagtcggcaccaaaggaacagagagataaagtgcagctcatggctgctgagcgg
aaagccaaagcggaggttgatgagatgaggatgagggtacgagatctggaagaaagggag
aggaaggagagcaagaagctggctgatgaagatgccctcaggaagatcagagttgcagaa
gagacaattgagcacctgcagaagaaactcgcagccaccaagcaggaggaagaagccctg
ctgagtgagatggacgtcactggccaggccttcgaggacatgcaggagcagaacagccga
ctactgcagcagctgcgggagaaggacgacgccaacttcaagctgatgagcgagcgaatt
aaatccaaccagatctacaagctgctgaaggaggaaaaggaggagctggctgaccaagtt
ctgagatttaaaacacaggtggacgcccagctgctggttgtgcagaagctggaagaaaaa
gagggcgtcctgcagagcacgctggccactctggagaaagagcttgccgtccggatgcaa
gccttggagctcaacaaaagaaaggcagtggaggcagcccagttggcagaagacctgaag
gtgcagctggaacacacgcagtccaagcttaaggagatccaggtctctgtggccgagaac
agaacagccagagagagggagagcagcaacctaaaacgagcacaggaggatctgtccagg
ctgagacggaagctggagaagcagaagaagatggaggtttacactgacgctgatgagatc
ctgcaggaggagattaaccagtacaaggccaagctgcgctgcccctgctgcaacacacga
gacaaggagacggtgctcaccaagtgtttccacgtcttctgctacgaatgtctgaagatg
cgttacgacaccagacagaggaagtgcccgaagtgcaactgcgctttcggagccaacgac
ttccaccgcatctacatcacctaa
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