Cynoglossus semilaevis (tongue sole): 103383172
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Entry
103383172 CDS
T04866
Name
(RefSeq) slit homolog 1 protein-like
KO
K06838
slit 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csem00536
]
103383172
Glycosaminoglycan binding proteins [BR:
csem00536
]
Heparan sulfate / Heparin
Axon guidance molecules
103383172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
LRR_1
hEGF
LRR_9
LRRCT
EGF_CA
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
103383172
NCBI-ProteinID:
XP_008314427
LinkDB
All DBs
Position
9:complement(5752..48172)
Genome browser
AA seq
1574 aa
AA seq
DB search
LRFSILALPGCGLPREDRNACWDSVWVGGHSSARLQLGSSDRDVEDAGVECGRAAAALLL
LSAGGCAEACPAPCTCLGSTVDCHNLGIHAVPKNIPKAAERLDLNGNNLTIITKTDFSGL
KHLRVLHLMENQIVNIERGAFDDLRELERLRLNKNRLNHIPELLFQKNEALARLDLSENV
IQAVPRRAFRGATELKNLQLDKNHISCIEEGAFRALRSLEVLTLNNNNISSIPVSSFNHM
PKLRTFRLHANSLRCDCHLAWLSPWLRQRPALGLFTQCSSPPKLRGLNLAELRKTDFSCS
GNGGSAFVQPCSLASGSCPPMCSCSNNIVDCRGRGLTAIPAHLPEAMTEIRLEQNGIKSV
PPGAFTSYKKLRRIDLSNNQISDIAPDAFHGLKALNSLVLYGNKITELPSGVFDGLASLE
LLLLNANKIHCIRATVFKDLENLALLSLYDNKLQSLAKGTFSSLLSIQTLHLAQNPFVCD
CNVKWLADFLRSNPIETSGARCASPRRLANKRIAQIKSSKYRPHAKEQYYIPGSEDRRLS
YECNSKPVCPAKCRCEANVVDCSNLRLTTFPEHLPSSTEELRLNNNDLSVLEATGAFKGL
TQLKKINLSNNKISDIEDGAFDGASSAVELHLTANHLESVRGSMFRGMEGLRMLMLRNNK
ISCIHNSSFTGLTNVRLLSLYDNQLRTILPGAFDTLPNLSTRNLLANPFNCDCRLSWFGV
WLRSRHIVTGNPRCQGPAFLREIPLQDVAVPDFRCEDGSVLEDSSCAAGTQCPSQCTCVD
TVVRCSNKHLQALPRGLPRNVTELYLDGNQFTSVPKELATFRYLQLVDLSNNKISSLSDD
SFSNMVQLTTLILSYNSLRCIPPLALGGLRSLRLLSLHGNDISELQQGIFNDVASLSHLA
IGANPLYCDCRLLWLSDWVKSGYKEPGIARCAGPRGMEGKLLLTTPADEVPWDAAVQSKC
SPCVSSPCQNQGVCQPHHTQLYTCSCRTGNRGKHCETPVDACVSNPCTNGGTCLSDEQTA
GFSCACAYGFHGMFCEVNVDDCPDHGCENGATCVDGVGNYTCLCPPNYTGLLCEEEEGAC
SPGRNPCKHQSTCISSPAGPRCVCIPGWVGPNCGIDYNECVDHRCQNGARCVDHLDGYSC
VCPQGYSGQFCEAAVSPPSPCQLARCQNDATCVEKSGVAVCQCPPGFEGQSCEKLVSVNF
VDRDSYVQLQDVKNWPQANITLQVSTAEDNGILLYNGDDEPIAVELHQGHVRVTYDPGNQ
ATTAIYSTETVNDGRFHTVELLTFNHMVNLSVDGGEPTNQEAPLFFGGMPEEVLPSSVGA
SSQTVNMSSFHGCIRNLYINHELQDFTRSHMKTGVVPGCQACLKIRCLHGVCHPDTAQCR
CHTGWTGQQCDQPITGGLAGTDVVTTATGVDPCAGSKCINGICVTLDAQSYRCNCKEGYY
GTLCNLQGEPAGSCQGLPCTNGQCQQTQDGLRCLCEPGYTGESCEVASPCRGEPMRDFHR
VQRGTAQCQTSKTFSWVECRGGCQADAGPGVSAAAPCCAPLRLRRRRLTFECDDGTSFTQ
DVEKPVECGCKECA
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtttctccatcctagccctgccgggttgtggacttccgcgggaagacagaaatgcc
tgctgggacagtgtctgggtcgggggccacagtagcgcacgcctccagctgggctcttca
gaccgggacgtggaggatgctggcgtggagtgcgggcgtgcggctgcagcgctgctgctg
ctgtcagctggcggatgcgcggaggcgtgtccggcgccgtgcacctgcctgggcagcacg
gtggactgtcacaacctgggcatccacgctgttcccaagaacatccccaaggctgcggag
agacttgatctgaatggaaacaacctgaccatcatcaccaagacagacttctctggactg
aaacacctcagagtccttcatctgatggagaaccaaattgtcaacatcgagagaggagct
tttgacgatctgagggagctggaacgacttcgtctcaacaagaaccgcctgaaccacatc
cctgagctgctgtttcagaagaacgaggctctggctcgactggatctgagtgaaaatgtc
atccaggctgttccacgcagagcattcagaggagccacagaactgaaaaatcttcagctg
gacaagaaccacatcagctgcatcgaggagggagcgttcagggcgctgcgttctctggaa
gtgcttactctgaacaacaacaacatcagcagcattcccgtctccagtttcaaccacatg
cccaagctccgcacctttcgtctccacgctaactccctgcgctgtgactgtcatctggcc
tggttgtctccgtggttacggcagcggccggcgttgggcctcttcacccagtgcagttct
cctcccaaactgaggggtctcaacctggccgagctgcgcaagactgacttttcgtgctca
ggaaacggcggcagtgccttcgtccagccctgcagcctggcgtctggatcctgtcctccg
atgtgttcctgcagcaacaacattgtggactgtagggggcggggcctgactgcaatcccc
gcccaccttcctgaggccatgactgagatccgtctggagcagaatggcatcaagtcagtt
cctccaggtgccttcacctcctacaagaagcttcgtcgaatagacctgagcaacaaccag
atctctgacatcgctccggacgctttccacggcctcaaagctctgaattcactggttctg
tacggtaacaagatcactgagctgcccagtggagtctttgatggtctggcctcactggag
ctgctgctcctgaacgccaacaaaatccactgcatccgagcgaccgtgttcaaggacctg
gagaacctggctctgctgtcgctctacgacaacaagctccagagtttggccaaaggcacc
ttcagctccctgctcagcatccagacgctccacctggcccagaaccctttcgtctgcgac
tgtaacgtcaagtggctggccgacttcctgcgctccaaccccatagagaccagcggggcg
cgctgtgccagtccacgccgcctcgcgaacaagcgcatcgcacagatcaaaagcagcaaa
tataggccgcacgccaaagaacagtattacatcccaggctccgaggaccggcggttgagc
tacgagtgtaacagtaagcccgtctgtcccgccaaatgtcgctgcgaggccaacgtggtc
gactgctccaacctcagactcaccacgttcccagaacacctgccgtcctccactgaagag
ctgcgtctcaacaacaacgacctctccgtcctggaggccaccggagccttcaagggtctg
acgcagctgaagaaaattaatttgagcaacaacaaaatctccgacatcgaggacggagct
tttgacggagcctcctcggcggtggagctccacctcacagccaatcacctggagtctgtg
aggggcagcatgttcaggggcatggagggactacggatgctgatgctgcggaacaacaag
atcagctgtatccacaacagcagcttcacaggactgaccaacgtcaggctgctgtcactg
tacgacaaccagctgagaaccatcctgcccggagccttcgacacgctgcccaacctgtcc
accaggaacctgctggccaatcccttcaactgcgactgtcgtctgtcctggttcggtgtt
tggctccggagtcgacacatcgtcacagggaatcctcgctgccagggtccggcttttctc
cgagagatcccactgcaggatgtggcggtgcccgacttccgctgcgaggatggatcggta
ctggaggacagcagctgtgctgcagggactcagtgtccgagtcagtgcacctgcgtggac
acggtggttcgctgcagtaacaaacacctacaggctcttcccagaggactgccgcgaaat
gtcacagagctatacctggatggaaaccagttcaccagtgtccctaaagaactggccacc
ttcagatatctgcagctggtagacttgagcaacaataaaatcagttccctgtcggacgac
tccttctccaacatggtacagctcaccacgctgatcctcagttacaactccctccgctgt
atccctccactggctctgggcggcctgcgctcactaagacttctctctctccatggcaac
gacatctctgagcttcagcagggcatcttcaacgacgtggcctccctgtctcaccttgcc
atcggagccaaccctctgtactgtgactgccgtctgctctggctctcagactgggtgaag
agcggctacaaggagcccggcatcgcccgctgcgcggggccccgcggcatggagggcaaa
ctgctgctgaccacgccggctgatgaggttccgtgggacgcagccgtccagtccaaatgt
agtccgtgtgtgtcctctccctgtcagaaccagggcgtctgtcaacctcatcacacacag
ctgtacacctgtagctgcaggactgggaacagaggtaaacactgtgagacgcccgtggac
gcctgtgtcagtaatccctgcaccaacggaggaacgtgtctgagtgacgagcagaccgca
gggttcagctgcgcgtgtgcgtatggtttccacggcatgttctgcgaagtgaatgtggac
gactgtccggaccacgggtgcgagaatggcgccacctgtgtggatggagtcgggaactac
acctgcttatgccctccaaactacacaggtctgctgtgtgaagaggaggagggggcgtgt
tcccccgggaggaacccctgtaagcaccagtctacctgcatcagcagtcctgcagggccc
aggtgtgtgtgtatccctggctgggtggggcccaactgtggcatagattacaacgagtgt
gtggaccaccgctgtcagaatggagcccggtgtgtggaccacctggacggctacagctgc
gtctgtccacagggatacagcggacagttctgtgaagcagccgtctctcctccgtcaccc
tgccagctggctcgctgtcagaacgacgccacctgtgtggagaagtcaggcgtagcggtg
tgtcagtgtcctccagggtttgagggtcagagctgtgagaagctggtcagtgtcaacttt
gtggacagagactcttacgttcagcttcaggatgtcaagaactggcctcaggccaacatc
acgctgcaggtgtcgacagctgaagacaacggaatcctcctctacaacggagacgacgag
ccaatcgctgtggagcttcatcagggtcacgtcagggtcacctacgatcctgggaaccag
gcaactactgctatctacagcactgagaccgtgaacgacgggcgattccacacagtcgag
ctgctgacctttaaccacatggtgaacctgtcagtggacggaggagaacccaccaaccag
gaggcccccctgttttttggaggtatgccagaggaggtgctgccctcgtctgtgggcgcc
tcctcccagaccgtcaacatgtccagtttccacggctgcatcagaaacctgtacatcaac
cacgagctgcaggatttcacccgcagccacatgaagaccggcgtggtgcccggctgccag
gcctgcctgaagatccgctgcctccacggcgtctgccatcctgacaccgcacagtgtcgc
tgtcacacaggctggacgggtcagcagtgcgaccagccaatcacaggaggcctcgctggg
acggacgtcgtcaccacagcaacaggtgtcgacccctgtgcgggcagcaagtgcatcaac
ggcatctgtgtgacgctggacgcacagtcgtaccgctgcaactgcaaggagggatactac
ggtactctgtgcaacctgcagggggagcccgcggggtcctgtcagggattgccgtgcacg
aacggccagtgtcagcagacacaggacgggctgcgctgcttgtgtgagccggggtacaca
ggggaaagctgtgaagtagcgtctccttgtcgtggagagccaatgagagacttccaccgt
gtacagcgtgggaccgcccagtgccagacctccaagaccttctcctgggtcgaatgtcgc
ggcggttgccaggcggacgccgggcctggcgtgtccgccgctgccccctgctgcgctcct
ctgaggctgcgacgtcggcggctgacgtttgaatgtgacgacgggacgtcgtttacgcag
gacgtggagaaacccgtggaatgcggctgcaaggagtgtgcgtag
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