Cynoglossus semilaevis (tongue sole): 103384898
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Entry
103384898 CDS
T04866
Symbol
agrn
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04512
ECM-receptor interaction
csem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103384898 (agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103384898 (agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
csem00535
]
103384898 (agrn)
Proteoglycans [BR:
csem00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
103384898 (agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Laminin_EGF
SEA
CFAI_KAZAL
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
103384898
NCBI-ProteinID:
XP_016891428
LinkDB
All DBs
Position
10:9035897..9288411
Genome browser
AA seq
2110 aa
AA seq
DB search
MRSDRTVRAGRTALLLAGLLVSLWQRCSASCPERELEDREEEANIVLTGTVDEIINMDPV
HNTYSCKVRVWRYLKGKTSVNREILLDGGNKVMIGGFGNPSICDNQVATGDTRIFFLNPA
PELMGPEHKNELMLNSSLMRITLRNLEDVEHCVEDKPPHFSPVQPPDACRGMLCGFGAVC
ESDPTNRAKAECVCKKMDCPSLVAPVCGSDSSTYSNECELEKAQCKTQRRIKVLRKGPCS
LKDPCTEVTCSYGSTCVQSSDGLSAKCMCPLSCEGKPEETVCGSDGKDYRNECELYEHAC
KKQKNIRVQHQGHCDPCRDSENSLNTQCRVEPLTRQPQVYSVPGSCPPDSEPLCASDGQT
YTSECAMMAMSLQKGVKLKKIHKGKCRRLEECKEECLFNGVCVVEQLSTRCSCDPIECDG
IYKPLCGKDGHTYSNDCMRRKAECVSRSLIPIKHLGPCDLNVPSPCLEKVCDHGAVCVVK
NNEPVCECPEACLQTNDPVCGSDGHSYGSPCEMRAMGCALQKAIHIHHKGPCDESCGNCS
FGAICDAQSGQCVCASECVESHQPVCGSDGTTYNSECELHVRACKEQMDLRVVSQGECKT
CGSTVCAWGTRCVRDKCECPQCSGEAFSPVCGTDGITYDNKCELRLSSCMHKKRIDVAKA
GSCDEDCGSGGSGSGSESCEQDRCRLFGGSWDEDAEEDRCVCDFSCQSVPHSVVCGSDGK
NYSNECELKKARCEKQDHLLIQNQGPCAVISATSPPELTAPQHCSLSVYGCCSDNTTAAL
GVEMAGCPSTCQCNSYGSYKGTCDPATGQCSCKPGVGGQKCDRCEPGFWNFRGIVTENMS
GCTPCNCDANGSVRDDCEQMSGLCSCKTGAKGMKCNVCPDGSKMGMNGCDKGPEAPTSCE
ELVCSFGASCIEINGQAHCECPPPDCDERNKTKVCGSDGVTYADQCQLRTIACRQDKDIT
VQHFGQCTEIISELTERPTTNPFTTIPSSTVAAVITTTARLVLDKVWAIPPPRTTKPETI
EQPPTATIFPTLTHHRTGSTHRPIFTKPLQSTAASSTSSFHSSPPPSAAATSFEDSGSGE
PSGDDQTEEEEGPEEEAGSGVPVEASGAEPVGPTVASTTVVKPEERSSCDNTEFGCCPDE
KTPSSSPDGANCPSTMKFSGFLHLDQVEGQEIFYTPEMEDPKSELFGETARSIEGALNDL
FRKSAVHRDFMSVRVRNLAPSNSILAFVEAHFRPDTKYTVEDIEGALLKQLKVSKDTGIA
VKKPEDENIRFTNYGLSSIPFFTTTTTTTTASITTVAPTTTPATTATAATTTAVLRTTSP
YITRRPPGTTRRPFNRRTTTTAAPVTTPPTTTAAETTTELPPVTTIAHYRGRIHHKPQKP
CDSHPCLHGGTCEDSGNDFSCKCPAGRGGAVCEKVIKYFIPSFGGQSYLAFPTMSAYHTV
RIAMEFRVSESNGILLYNGQGGKKDFISLALVNGRVELKFNTGSGTGTVVSKVQVSQGRW
HQLVVTRNRRNAMLSVDNEPHIEGQSPQGTEGLNLDTDLFIGGVPEEIKQDVKERISVDT
GLVGCIRLLDVNNRVLNLQENGGHSLYGSGVGECGNNPCQPNPCKNSGSCEVKEAEMFHC
TCSKGFWGPTCADVHDPCVPNRCHPSSQCQVLPEGGYKCECPMGREGKHCEKVTERRGAY
MPQFNRDSYLELKGLHLYGHDLRQKLSMTVVLMANDSNGVIFYNGQKSDGKGDFISLALN
NGILEFRYDLGKGPAIIRSREPLQLHVWNTINLERSNRKGEIMVNKKDPVQGEAPKSRKN
LHVDLNLKESLYVGGAPDYSRIARAAALTDGFKGTIQKIILMGTPILKEENALRSSNVAM
FQEHPCAQEPCHNGGHCNPHLDTYECVCLSGFSGGHCQNTIYEKSAGETEAIAFDGRTFI
EYHNAVTKSQLTNEIPDPESLENPADQSEKALLVNKFELSIRTEATQGLVLWSGKGVERS
DYIALAIVDGRVQMTYDLGSKPVVLRSSVRVDTNRWIRIKASRALRDGSLQVGNEAAVTG
SSPLAATQLDTDGALWLGGLEELAVTRRLTKAYSTGFVGCIKDVVVDGVELHLVEDALNS
PRILQCPAAK
NT seq
6333 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcggatcggacagtccgggctggccggacagcgctgctcctggccgggctgctc
gtgagtctgtggcagcgctgctctgcaagttgcccggagagagaactggaggacagagag
gaagaggccaacatagtcctgaccggcaccgtggacgaaatcatcaacatggacccggtg
cacaacacctactcctgcaaggtacgagtttggcgctacttgaaaggcaagaccagtgtc
aaccgtgaaatcctgctggatggtgggaacaaggtgatgattggcggctttggcaacccc
agcatttgtgacaaccaagtggccacgggcgacacgcgcatattttttctcaaccccgcc
ccggagttgatgggacccgaacacaagaacgaactcatgctgaactcaagtctgatgagg
attactctgcgcaacctggaggacgtggagcactgtgtagaagacaaacctcctcacttc
tcaccagtccagcctcctgatgcttgtaggggaatgctgtgtggttttggtgcagtgtgt
gagagcgatccaaccaaccgggccaaggctgagtgcgtttgcaagaaaatggactgtcca
tccttggtggcgccggtttgtggctcagattcatccacctactccaatgagtgtgaactg
gagaaagcccaatgcaagacacagagacgcatcaaggtgctgcgcaaaggaccgtgctct
ctgaaagacccctgcactgaggtgacctgtagctacggcagcacctgtgtccagtcatca
gacggcttgtcggctaaatgcatgtgccccctcagctgcgagggcaagcctgaggagacg
gtgtgtggcagtgatgggaaagactaccgcaacgagtgtgagctgtacgagcacgcctgc
aagaaacagaagaacatacgggtgcaacaccaaggccactgtgacccatgtagagacagt
gagaacagtctaaacacccagtgcagagtggagcctctcacccgccaaccacaggtgtac
agcgtcccggggtcatgtcccccggacagtgagcctctgtgtgccagtgatggtcagacc
tacaccagtgagtgtgccatgatggcaatgagcctgcagaaaggagtcaagctgaagaag
atccacaaaggaaagtgcagaagacttgaggaatgtaaagaggagtgtcttttcaacggt
gtctgtgtggtggagcagctgagcacccgctgttcctgtgacccaatcgagtgtgacggc
atctacaagcccctgtgtggcaaggacggccacacctacagcaacgactgcatgagacga
aaggcggagtgtgtgagcaggagcctcatccccatcaagcatctggggccctgtgatctc
aatgtacccagcccgtgtttggaaaaggtgtgtgatcacggggcagtgtgcgtggtgaag
aacaatgagccggtgtgcgagtgcccagaggcctgtctgcaaacgaacgacccggtgtgt
ggatctgacggccacagctacggcagcccgtgtgagatgcgagcgatgggctgtgcactt
caaaaggccatccatattcaccataagggaccctgtgatgagtcttgtggcaactgctct
tttggagcaatctgcgacgctcagagcggtcagtgtgtgtgtgcgtcagagtgcgtggag
tcccatcagcctgtgtgtggcagcgacggcaccacctacaacagtgagtgtgagctgcat
gtacgagcctgcaaagaacagatggacctgcgggtggtcagccaaggagagtgcaaaaca
tgtggcagtactgtttgtgcctggggcactcggtgtgtcagggataagtgtgagtgccca
cagtgttcaggcgaggccttctcgccagtgtgtggcactgacggcatcacctacgacaac
aagtgcgaactccgcctgtcgtcctgcatgcataagaagagaattgacgtggcgaaggcc
ggcagctgtgatgaagactgtggctcaggaggttcaggctccgggtcggagagctgcgag
caggaccgctgtcgtctctttggaggctcgtgggatgaagatgcagaggaggatcgctgc
gtttgtgatttcagctgtcaaagtgttcctcacagcgtggtttgtggttcagatggaaag
aactacagcaacgagtgtgagctgaagaaggccagatgtgagaaacaggatcacttgttg
attcagaatcagggaccatgtgcagtgatttcagccacatctcctccagagctgacagca
ccccagcactgcagtctgtctgtgtacggctgctgctctgacaacacgacagctgcctta
ggagtcgaaatggctggatgtccgagtacctgccagtgtaacagctatggatcctacaaa
ggaacgtgtgacccagccactggccagtgctcctgtaaaccaggtgtcggggggcagaag
tgtgaccgctgtgagccgggattctggaacttcaggggcattgtgacggagaacatgagc
ggctgcacaccgtgtaactgtgacgccaacggctcggtccgggacgactgtgagcagatg
tctggtctgtgttcctgcaagacaggggcgaagggcatgaagtgcaacgtgtgtccagat
ggaagcaaaatgggcatgaacggctgcgacaaaggtcctgaagctcccacttcatgtgaa
gagttagtgtgcagttttggagcttcctgcatcgagattaatggccaagcccactgcgag
tgccctccacctgactgtgatgagagaaacaaaaccaaggtgtgtggctcagacggggtg
acctatgccgaccagtgccagctgaggaccatagcctgcaggcaagacaaggacatcaca
gtgcagcacttcggacagtgcacagaaatcatctccgagctgacagaacgacccaccacc
aacccattcaccaccattcccagctcaactgttgccgccgtcatcaccaccacagcccgt
ttggttctagacaaggtgtgggccatcccgcctccgaggacaacaaaaccagagaccata
gaacagcccccgaccgccaccatcttccccactctcactcaccaccgcacggggtcaact
cacaggcccatcttcaccaagccactgcagtcaacagccgcctcctccaccagctccttc
cacagcagccctccaccctctgctgcagcgacctcctttgaagactctggtagtggggag
ccaagcggggatgaccagactgaagaagaggaggggccagaagaggaagcgggtagcggt
gttccagtggaggccagtggggcggagcctgtcggtcccactgtggccagcactacagtt
gtcaaacctgaagaaaggtcgtcctgtgacaacactgagttcggctgctgtccggatgaa
aagacaccatcgagcagtccagacggtgccaactgtccctctaccatgaagttcagtgga
ttcctgcacctggaccaagtggagggccaggagatcttctacaccccagagatggaggac
ccaaagtctgagctgttcggagagacggcccgcagcatagagggcgctctcaatgacttg
ttcagaaagtccgcggtgcacagagacttcatgagtgtccgggtccgaaatctggctccc
agcaactccatcctggcctttgtggaagctcacttcagaccagatacaaaatacacagtg
gaggacatcgaaggagccctgctgaaacagctgaaggtctccaaagacacaggcatcgct
gtgaagaagccggaggatgagaatattcgcttcaccaattatggtctctcctctatcccc
ttcttcaccaccaccaccaccaccactacggcctccatcaccacggtcgctcccaccacc
acacctgccaccacagctacagcagcaacaacaacagctgtgcttcggacaacctcaccg
tacatcacccgccgtccaccaggcaccacccgcagaccgtttaacagacgcaccaccaca
actgccgcaccggttaccacaccaccaaccaccacggcagctgaaacgacaactgagctg
cctccagtgactaccatcgcccactacaggggaagaattcatcacaagccccagaagccc
tgtgactcacacccctgtctacatggaggaacctgtgaggacagtggaaatgacttcagt
tgcaagtgtccggctggacgagggggcgcagtgtgtgaaaaagtcatcaagtatttcatt
ccgtccttcggaggccaatcctatttggccttcccaaccatgagcgcctaccacactgtc
cgcattgccatggagttcagagtgtccgagtccaacggcatcctgctctataatggacag
ggaggcaagaaggacttcatctccctggctctggtcaatggcagagtggagctgaagttc
aacaccggctccggcacagggactgtggtcagcaaggtgcaagtcagccagggccgctgg
catcagctggtggtgacacgcaatcgccgaaatgccatgctgagtgtagacaatgagcca
cacatcgaaggccagagcccccaaggcactgaaggcctcaacctggacactgacctcttc
attggaggagtgcccgaggaaattaagcaggatgtcaaggaaagaatatctgtggacaca
ggtctggttggctgcatccgactgctggacgtcaacaaccgagttcttaacctgcaggag
aacggtggccacagtctgtacggcagcggtgtgggtgaatgtggcaacaacccctgtcag
cccaatccatgtaagaacagcggctcatgtgaggtcaaagaggctgagatgttccactgc
acttgcagcaaaggattctggggtccaacttgtgctgatgtccatgacccttgtgtgcca
aaccgatgccatccatcctcacaatgccaggtgcttccagaagggggctacaaatgcgag
tgccccatgggtcgtgaaggaaaacactgtgaaaaagttactgagaggagaggggcttac
atgccacaattcaacagagactcatacctggagctgaagggacttcatctctacggacat
gatctgcgccaaaagctgagtatgactgtggttctcatggccaacgactccaacggcgtg
atcttctacaacggccaaaagtctgacggtaaaggagactttatctcactggctctaaac
aatggaatcctggagttccgctatgacctgggcaagggtcctgcaatcatccggagtaga
gaaccgctccagctacatgtttggaacaccattaacctggagcgctccaaccgcaaggga
gagatcatggtcaacaaaaaggacccagtccaaggggaggcgccgaaatcacgcaagaac
ctgcacgtagatctgaacctaaaggagtcactgtacgtcggtggagctcctgactacagc
cgcatagcacgagctgcggctctcaccgacggcttcaaaggaaccatccagaagatcata
ctgatgggtacacccatcctgaaagaggagaacgcgctgcgctccagcaatgtcgccatg
ttccaggaacacccgtgtgcccaggagccctgccacaatggaggtcactgcaaccctcat
ctggacacctacgagtgcgtctgcctcagcggtttctcaggcggacactgtcaaaacacc
atttatgagaagtctgctggagaaactgaggccatcgcctttgacgggaggacgtttatc
gaatatcacaatgctgttacaaagagccaactgaccaatgagatcccagatcctgagtct
ctggagaatccagccgaccagagtgaaaaggctctgctggtgaacaagtttgagcttagc
atccggacagaggccactcagggcctggtgctgtggagcgggaaaggggtggagaggtca
gactacatcgctctggccatcgtggacggacgtgtccagatgacgtacgatctgggttcc
aagcctgtggtgctgcgctcctccgtgcgagtcgacaccaaccgctggattcgcatcaag
gccagcagagcactgagagacggctctcttcaggtcggcaacgaagcagcagtaacagga
tcatcgcctctggcagcaacgcagctggacacggacggcgcactctggttgggtggtctg
gaggagctggccgtcacccgtcggttgaccaaggcctacagcactgggtttgttggctgc
atcaaagatgtggtggtggatggcgtggagctccacctggtggaggacgccttaaacagc
cccagaatactacagtgtcctgccgccaaataa
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