Cynoglossus semilaevis (tongue sole): 103388059
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Entry
103388059 CDS
T04866
Symbol
chd3
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 3
KO
K11642
chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103388059 (chd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csem03036
]
103388059 (chd3)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103388059 (chd3)
Chromatin remodeling factors
NuRD complex
103388059 (chd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
PHD
DUF1087
Chromo
CHDNT
HDA2-3
ResIII
HTH_23
DEAD
AAA_22
PHD_2
zf-HC5HC2H_2
RskA
Motif
Other DBs
NCBI-GeneID:
103388059
NCBI-ProteinID:
XP_016889427
LinkDB
All DBs
Position
1:27228128..27266672
Genome browser
AA seq
1906 aa
AA seq
DB search
MRPMIAKKNPKIPMSKMMTILGAKWREFSSNNPFKGNAAAIAAAAAAAAIAVAEQVSAAT
ASPEPPPQPPPIRKAKTKEGKGPGYKKRSKSPRVSDKKKALAKAKKMAPIRIKLSPIGAK
RKKSCSSEDLDEEESEQEDSSVHSSSVRSDSSGRVKKNKRGRPAKKKKKTPGEEEGEGYE
TDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDKAPEGKWSCPHCEKEGIQWEAKDE
DFEDFEEDSEDRVISDVGVGVPTGADEEDDDHMEFCRVCKDGGELLCCDTCTSSYHIHCL
NPPLPEIPNGEWLCPRCMCPPIKGRVQKILHWRWGEPPPPIPVPPPPDAPPDAPPPPPMK
GRAEREFFVKLVAQSYWHCTWITELQLEIFHSVMYRNYQRKTDMDEPPSLDYGSGGEDEN
GGGKSEKRRAKDPEYAIMEDKYYKYGIKAEWMMIHRIINHSVDKKGTYHYLVKWRDLTYD
QCTWERDDMDIPDFAIYRANYWRHRDAIMKEDPDKPRKRSRNQEGEEEEEESNPASPVTD
PTIKYEEQPDFVTSTGGTLHLYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYS
LFKEGHTKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFSFDDTA
VKGGKKAFKMRREAPIKFHVLLTSYELVTIDQTALKSIDWACLVVDEAHRLKNNQSKFFR
RLNDYKIDHKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFLEEFADISKEDQIKKLH
DLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKLILTKNFEALNSKGGGNQVS
LLNIMMDLKKCCNHPYLFPVASMEAQKTPSGAYEGSALTKASGKLMLLQKMLRKLKEQGH
RVLVFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGACQFCFLLSTR
AGGLGINLATADTVVIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQV
AKRKMMLTHLVVRPGLGSKAGSMTKQELDDILKFGTEELFKDEGEGMKNSTGDKVEDEGS
VIHYDSTAIERLLDRSQDATDDSDVQNMNEYLSSFKVAQYMVREEDKIEEIEREIIKQEE
NVDPDYWEKLLRHHYEQQQEDLASKLGKGKRNRKPVNYNDAAQEDQEWHADISDNQSEYS
VGSEEEDDDFDDRPEGRRQSRRQLRNDKDKPLPPLLARVGGNLEVLGFNTRQRKAFLNAV
MRWGMPSQDAFSSHWLVRDLRIKTEREFKAYVSLFMRHLCEPVADGAETFADGVPREGLC
RQPVLTRIGVMSLVKKKIQEFEHINGRWSLPELKPEVIVDKSSSRASSPTVKTTTTTPDA
SYNNTPCTSKPATPAPADSKQEKNGKELEKGEGEKEKHENKKTGDPEEISSSAKEKPHGV
SPVQNEEGREETEKERAETAAAPTAAEEKENRQEEPREEAKHKPKQDAESKEEKSEGDKL
VEEKKGDKEKQEEASTEVEVKKAEEVKGEKDAGKEAKAAREEVPPPPPPPKGNVVKPHSD
RPRFMFNIADGGFTELHTLWQNEERAAISSGKMNEIWHRRHDFWLLAGIVIHGYARWQDI
QNDPQFAIVNEPFKSQANKGNFLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPS
HPAMALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLP
ATLSRVPPIAARLQMSERSILSRLASKGTETHTPSPIPPGPYATPQNYGAPFTPAPPSSL
HMGGSNYSQMPPGSFISEAAATTAAAAGAVGGVAGGSPITVFCQKTKEHDLVQRQRVVDL
WKDGKSEGAIGQELRMPKSTVHSIIVKYRLSNTVENLPRNGRPKKP
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgatgatcgccaagaagaacccgaagatccccatgtcaaagatgatgaccatt
ttgggggccaaatggagagagttcagctccaacaaccccttcaagggcaatgccgctgcg
attgcagctgctgctgcggccgctgccattgccgtcgccgagcaggtctcagctgcgacc
gcctcaccagagccacctcctcagccgccacccatcaggaaagccaagacaaaggagggc
aaagggcctggctacaagaagcgcagtaaaagtccccgagtctcagacaagaagaaggct
ctggccaaggctaaaaaaatggcacctattcgcatcaaactgtcacctataggtgctaag
agaaagaagagctgctcgagtgaggacctggatgaggaggagtcagagcaggaggactcc
agcgttcacagctcctccgtacgttccgacagctccggtcgcgtcaagaaaaacaaacga
gggcggcctgcaaagaagaagaagaaaaccccaggtgaggaggagggtgagggctacgag
acagaccatcaggactactgtgaggtgtgtcagcaggggggtgagatcatcctgtgtgac
acctgtcccagagcgtatcacctggtctgcctagaacctgagctagacaaagccccagag
ggcaagtggagctgcccacactgtgagaaagaaggcatccagtgggaagcaaaggacgag
gactttgaggactttgaagaggacagtgaggacagagtgatatcagatgtgggtgtcggt
gtgcccacaggcgcagacgaggaggacgatgaccacatggagttctgtcgggtgtgtaaa
gatggaggggagctgctgtgctgcgacacctgcacctcctcgtaccacatccactgtctg
aacccgccgctgccggagattcctaacggagagtggctgtgtccacggtgtatgtgtcca
ccaatcaaaggtcgggtccagaagattctgcactggagatggggagaaccaccacctccc
atccctgttcctccacctcctgacgctccaccagacgcccccccaccaccacccatgaaa
ggccgagccgagagggagttcttcgtgaagctggtggcacagtcctactggcactgcacc
tggatcactgagctccagttggaaatcttccactccgtcatgtacaggaactaccagagg
aagacagacatggatgaaccccccagtctggactacggttctggaggggaagatgagaat
ggaggtgggaagagtgagaagagaagagccaaggacccagagtacgccatcatggaggac
aagtactacaaatatgggatcaaagctgagtggatgatgatccaccgcatcatcaaccac
agtgtggacaagaaggggacgtaccactacctggtcaagtggagagacctgacctatgac
cagtgcacctgggagagggacgacatggacatccctgactttgctatttacagagccaac
tactggaggcacagggacgccatcatgaaggaagatccagacaaacccaggaaaagaagc
agaaaccaggagggtgaggaggaggaggaggagtccaaccctgccagccccgtcactgat
cctaccataaagtacgaggagcagccagactttgtcacatccaccggaggaacgctgcac
ctttaccagctggagggtctgaactggctgagattctcctgggcccagggcacagacacc
atcctggcagatgagatgggtctgggaaagaccatccagaccattgtctttctctactct
cttttcaaagagggtcacactaaaggcccgttcctggtcagcgccccgctctctactatc
atcaactgggagagggagtttgagatgtgggcgccagacttctacgtggtgacgtacact
ggagacaaggacagcagagccatcatcagagagaacgagttctccttcgacgacacggcc
gtcaaaggggggaagaaagccttcaagatgaggagggaagcaccaattaagttccacgtg
ctgctgacatcgtacgagctggtgaccatcgaccagacggcactcaagtccatcgactgg
gcctgtctggtggtggatgaagctcaccgtctgaagaacaaccagtcaaagtttttcagg
cgactgaacgattacaagatcgatcacaagctgctgctcacaggaactcctctgcagaac
aacctggaggagctgtttcacctcctcaactttctcacacccaaccgcttcaataacctc
gagggattcctggaagagtttgctgacatttccaaggaagaccagatcaagaagctccac
gacctgctgggacctcacatgctgcgaaggctgaaggccgatgtcttcaagaacatgccc
gcgaagacggagctgattgtacgggtggagctgagccccatgcagaagaaatactacaag
ttaatactgaccaagaactttgaggctctcaactccaagggtggaggaaaccaggtgtct
ttgctcaacatcatgatggacctgaagaagtgctgcaaccacccatacctcttccctgtg
gcctccatggaagcccagaaaactcccagcggtgcgtacgagggctcggccctcactaag
gcttctgggaaactgatgctgttgcagaagatgctgaggaaactgaaagagcagggacac
agagttctggtcttctcgcagatgaccaagatgctggacctgttggaggacttcctggac
tacgaagggtataaatatgagagaatcgatggaggcatcactggagcgctgagacaagag
gccatcgaccgatttaacgctcctggcgcctgtcagttttgttttttgctctccaccaga
gcaggaggtttgggtataaacctggccacagcagacaccgtcgtcatctttgactcagac
tggaaccctcacaacgacattcaggccttcagtcgagcccacagaatcggacaggctaac
aaggtgatgatctaccgttttgtgactcgggccagtgtggaggagcgcatcacccaggtg
gccaagagaaagatgatgctgacccacctggtggttcggccaggtctgggatccaaggcc
ggctccatgaccaaacaggaactggacgacatcctgaagtttggcaccgaggagctgttt
aaggacgagggagaaggaatgaaaaacagcacaggggataaagtggaggacgagggcagc
gtgattcactacgacagcaccgccatcgagaggctgctggaccgcagccaggatgcaacg
gacgactcagacgtccagaacatgaacgagtacttgagctccttcaaggtggctcagtac
atggtccgagaggaggacaagatcgaggagattgaacgtgagatcatcaaacaggaggag
aatgtggatccggattactgggagaaactgttgcgacatcactacgagcagcagcaggag
gacctggccagcaaactggggaaaggcaagaggaaccgcaaaccagtcaactacaacgac
gcagcccaggaagaccaagagtggcacgctgacatctctgacaaccagtctgaatattct
gtgggctccgaggaggaggacgacgactttgacgatcgacctgaaggtcgacggcagtcg
cgacgacagctgaggaatgacaaggacaaacctctgcctcctcttctggccagagtggga
ggaaacctggaggtgctgggcttcaacacacgacagcgaaaggctttcctgaacgcagtg
atgcgctgggggatgccatctcaggacgctttctcctcacactggctggtgcgagacctg
aggataaagacagagagagagttcaaagcctacgtctctctcttcatgcgacacctgtgt
gagccggtggctgacggggctgagacttttgccgacggcgtcccgagggagggcttgtgt
cgacaaccggtcctcaccagaatcggagtcatgtcccttgtcaaaaaaaagattcaggag
tttgaacacatcaacggacgctggagtctcccagagctcaaacctgaagtcattgtggac
aagtcgtcctccagagcctcctctcctacagtaaagaccacaacaaccacgcctgacgcc
agctataacaacacaccctgcacttccaaaccagctacgcctgctcctgcagactccaag
caggaaaagaatggaaaagaattggaaaagggagaaggagagaaggagaagcatgagaac
aagaagactggagaccctgaggagatttcttcatcggccaaggaaaagccacacggcgtg
tcccctgtccaaaacgaagaaggcagagaggagacggagaaggagagagctgagacagcc
gctgctcctactgctgcagaggagaaggagaatcggcaggaggagccgagagaggaggcc
aaacacaaaccaaaacaggatgcagagagtaaagaggagaaatcagaaggagataagctg
gtggaggagaaaaagggggacaaagaaaagcaggaggaggcgtctacggaggtggaggtg
aagaaagccgaggaggtgaaaggagagaaggatgctgggaaagaagctaaggcagctagg
gaggaggtgccgccgccgccgcctccacctaagggtaacgtcgtgaaaccacacagcgac
aggccacgcttcatgttcaacatcgctgacggaggattcacagagctgcacactctctgg
cagaacgaggagcgtgctgccatctcctcggggaagatgaacgagatctggcaccgccga
cacgacttctggctgcttgcgggaattgtgatccatggttatgcccggtggcaggacatt
cagaacgaccctcagttcgccatcgtcaacgagcctttcaagtcccaggccaacaaaggc
aacttcctggagatgaagaacaagttcctggctcggaggttcaagctcttggagcaggct
ctggtcatcgaggagcagctacgacgggctgcgtacctgaacatgacccaggaccccagc
caccctgctatggccctcaatgcccgcttcgcagaggtggagtgtctggctgagtcacac
cagcacctgagcaaggagtcactggcgggcaacaagccggcaaacgctgtcctccacaaa
gtgttgaaccagttggaggagctgctgagcgacatgaaggccgacgtgacacggctaccg
gccacactctcccgagtcccacccattgccgcccgtctgcagatgtcagagcggagcatc
ctgagtcgattggccagcaagggcacggagacacacacaccctcgcccattcctccagga
ccttacgccaccccccagaactacggcgcccccttcactcccgccccgcctagctccctg
catatgggaggatccaactacagccagatgcctccaggttccttcatatcagaagccgct
gcaaccaccgctgctgctgctggggccgtagggggagtcgcaggagggtcacctatcacc
gtcttttgccaaaagaccaaggagcacgatttggttcaacggcaacgggtagtggacctc
tggaaggatggcaagtcggagggtgccatcgggcaggagctgaggatgcccaagtccaca
gtgcacagcatcatcgtcaagtaccggctcagcaacacggtggagaacctgccgcggaat
ggccgaccgaaaaaaccgtga
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integrated database retrieval system
