Cynoglossus semilaevis (tongue sole): 103388261
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Entry
103388261 CDS
T04866
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X5
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103388261 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103388261 (cnot3)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103388261 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103388261 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
103388261
NCBI-ProteinID:
XP_008321394
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Position
13:5465805..5476749
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AA seq
911 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWLASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTSTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIDELKRLIERHRFHI
RMLETILRMLDNDSVPVDAIQKIKDDVDYYIDSSQDPDFEENEFLYDDLDLEDIPAALVA
TSPSGQGNVEDELYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSEVSQSP
VKNGTPSLLSSFSSSATSGSSSSSSLVSMASVVGGNNPVPTSNSLIGSFSSAVQQHQHQP
AQQQQQQSQPPNQPSQQQQQQPPQTKPCVPSNNTPSPPSNPLLPASTAPSLLTPSTPSSS
APNSQSQTTPGPTSVSSLGLGLGLGLSKGGLTGTSSASQMSALGLSGQHAPLNTMAGLLS
GSTPAPYAQAAASGGLGLSSTTQSSISVESSTSIPTSGSSGVTTNGAGTGLGLLGSSSAH
SALSGSILGLVPGQSVAPGSSQMPPSTVSTTSGVVGMMGGNGGSVGVVGGVGVNAAPARP
PSGLKQNGSTSYSAVVAESSTESALSTPNQSQSSQPSSLSSSTSQPMDNGPSLISSITLP
PSSPSPSFSDSTPGGGSLLNGPHSYTQASEGLKPPEPLSSLKAMAERAVLGPGLDGEIPN
LHLTDRDIFSSSSAAPGTPAAPQPSVSEVSIPPSLGVCPLGPTPLPKDQLYQQAMQESAW
THMPHPSDSERIRQYLMRNPCPTLPFHHQVPPHHSDSIEFYQRLSTETLFFIFYYLEGTK
AQYLSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTF
EYRYLEDRDLQ
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaactacaaggtgagatcgatagatgtttgaaaaaagtagctgaa
ggtgtagaacaatttgaagacatctggcaaaagcttcacaatgcagccaatgccaatcag
aaggaaaaatatgaggctgacctcaagaaagagattaaaaaattgcagcgattaagagat
caaattaaaacatggttggcctcaaacgagatcaaagacaaaaggcagctagtcgagaat
cgcaaactaatagagacgcaaatggagcgtttcaaggtggtagaacgtgagactaaaaca
aaagcctactccaaagaaggcttgggtttggctcagaaagtggatcctgctcagagggaa
aaggaggaaactggacagtggctaacaagtacgatagacactttaaatatgcaggtggat
cagtttgaaagtgaagtggaatcgctttcggttcaaacaagaaagaaaaaaggtgataag
gagaaacaggacagaattgatgagctcaagcggctgattgagaggcataggttccacatt
cggatgttggagaccatattgcgaatgctggataacgactcggtgccagtggacgcgatc
caaaagatcaaggacgacgttgactactacatcgattcatcccaggatccagattttgag
gagaacgagttcctgtatgacgacttggacttggaagacatccctgcagctttagttgca
acttctccctcaggtcagggcaacgtggaagatgagttgtatctccattccagcagcact
cccacttccaccacctcttcgtcacccatccctccatccccagctacatgcactgccgag
aactcagaggacgataagaaaaggggacggtcgacagacagtgaagttagtcagtcacct
gtgaagaacggcaccccatccttgctttcttctttctcttcctctgccacctctgggtct
tcctcatcctcctcccttgtgtccatggcgagtgttgtcggaggcaataaccctgtccct
accagcaacagtctaataggaagtttcagcagcgcagtgcagcagcatcagcatcaaccg
gcacagcagcagcagcaacagtctcagccgccaaaccaaccgtcgcagcagcaacagcag
cagccgcctcagacgaaaccctgtgtcccgtcaaacaacacccccagtccacccagcaac
cccctactcccggcctccactgcgccctctctccttacgccgagcacgcccagttcgtcc
gcccccaactctcagtctcagaccacacccggtccaacctcagtttctagtttggggctc
ggactgggcctggggttgagtaaaggaggcttgacggggaccagcagtgccagtcaaatg
tctgctttaggtcttagtggccaacatgcgcctctcaacacaatggcagggctcctttcg
ggctccactcctgccccttatgctcaggcagcagcatcgggcgggttgggtctgagcagc
accacccagtccagcatttcagtagagagcagcacttccatccccacctctggctccagt
ggagtcaccaccaacggagcaggcacggggctcggattacttggctccagttcggctcac
agcgctctgagcgggagtattctgggtctggtaccaggtcaaagcgtggcacctggttcc
tcacagatgcccccaagtactgtcagcactacctctggtgtagtcggcatgatgggagga
aatggtggaagtgttggtgtggttggaggagtgggtgttaatgctgctcctgctcggcct
ccgagtggactcaagcagaacggaagcacaagttacagtgcggttgtagcagagagctcc
acagaatcagctctaagtacaccaaaccagtcacaaagcagccagccctcatctctcagt
tcctcaaccagccagccgatggacaatggccctagtttaatcagttccatcacgctgcct
cccagctctccgtccccctcattctcagacagcacacctggaggaggaagcctcctgaac
gggccccactcctacactcaggcctctgagggcctcaagccacctgagcctctgagttct
ctgaaagcgatggctgaaagagccgtactgggaccaggtctggatggagagattcccaac
ctccatctgacagacagagacatcttctccagttcgtctgcggcgccgggcactcctgca
gctcctcagccgtctgtgtcagaggtcagcatcccaccctcactgggagtctgtcctctg
ggcccaactcctctccccaaagaccagctctaccagcaggccatgcaggagtctgcttgg
acccacatgccccacccctcagactctgagaggatcaggcaatacctgatgaggaacccg
tgtccgacgttgcccttccatcatcaggtcccgccccaccactctgactccatagagttc
taccagaggctgtctactgaaacactgtttttcatcttctactacctggagggcaccaag
gctcagtatctgtcggccaaggctctgaagaaacaatcgtggaggtttcacaccaagtac
atgatgtggttccagagacatgaggagcccaagaccatcactgatgagtttgaacagggc
acttacatttatttcgactatgagaaatggggccagaggaagaaggaggggttcaccttt
gagtataggtacctggaagaccgagacctgcagtga
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