Cynoglossus semilaevis (tongue sole): 103388802
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Entry
103388802 CDS
T04866
Symbol
arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X6
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04270
Vascular smooth muscle contraction
csem04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
103388802 (arhgef1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
103388802 (arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103388802 (arhgef1)
Membrane trafficking [BR:
csem04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103388802 (arhgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
Med9
Motif
Other DBs
NCBI-GeneID:
103388802
NCBI-ProteinID:
XP_008322194
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Position
13:complement(17175324..17215363)
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AA seq
990 aa
AA seq
DB search
MSIIGAEDEDFENELTDVVEDQCSSFNHIEKLKERPTHLLVFLHHVILQFDPAPLLCYLH
ADLFKNLGAKETKKQFVEFHNTFIDKSANLQVAIPRHVSHELDRTRPELIADDVQRLYAQ
EVQAQQAAEVAKQLEDFRQKRTMGMTPNEAELIDVESHYHTDRVPKEMKEKSVAENLLEK
MFETQPPIVSDEDKCQSIFSAVVVYMKHLGVKSRAVDKKSRGGFFRRQLVKNKKDESTKA
KPRGVFPGIPSWIAGNTEVKPKMETEVEKDKQNQDRKGPAPGRVSLTDIAAPSAPSKKSG
STGSFVSVPVVDVNETSGNNVSSTNIPEASHNDGVSSTRLEPPVLCDGGDVSPVTPVGVL
TIGEPISPIDLSTDEVVDSVEGPLLVVEGPAHSPTSPSPQLEEVDPRLLEFEQDPANWRE
LASPEALATLSKKEIKRQEVINELFATEHAHVRMLSVLQTVFSKPMERVALLTATEVATI
FPNLDEIIDMHYNFHENLKKRRLEDNFIIKSISTTVQNRFDGTEGEWFQKLTARFCSHQS
WALEQIKIRQKKDPRFNSFIQESESKPQCRRLQLKDIIPIEMQRLTKYPLLLENIAKNTE
NTVEKERIKQSAECCRKILNHVNEEVKVMENFLTLKDYQRRLDTSGLKPSNELYTEYKNI
DLTQKKMLYEGPLIWRVTKEKGIEVHCVLLCDLLVLLQKQDDKMVLKCQSKSTIAVQEGK
QMLSPIIKLDSVFLREVATDRKAFYVIFTWESGAQIYELVAQSVGERKIWTDVIKTAVDD
LKKSVPVKPVLPEVPHIYPPRPIVSLGENGSLKRSSVLCLPTDQDKDSLTDDKSSDLRHR
LIDFLSEKGFDLLGHSNSDQEKIAGVALEEVMSLKRLLVGSISLSEDSQGDEENGEEQSE
LDSCHSTDKSQSTERGGEEESDDISEKEAKSEDERSISAPMVLSPERMEEVHRRLRSLEQ
QLKRLQNVEEEHHRLQEVLSQFSLEGVNFQ
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatcggggctgaagatgaggattttgagaatgaactcaccgatgtggttgag
gaccagtgttcaagctttaaccacatagagaagctgaaagaacgaccgacccacctgctc
gtattcctgcatcatgttattctgcagtttgatcccgctcctttgctatgctacctccat
gctgacctcttcaagaacctcggtgccaaagagaccaagaagcagtttgtggagttccac
aacaccttcatagacaagagtgcaaatctccaggtggcaataccacgacatgtatcacac
gaattggaccggacacgtccagaactgatagctgacgatgtccagaggctatacgcccag
gaagttcaggctcaacaagctgccgaagtggctaaacagctggaagacttcaggcagaag
cggacgatgggtatgacccccaatgaagcagagcttatcgacgtggaaagccattatcac
actgaccgcgtcccaaaagagatgaaggagaagtctgtggcggaaaaccttctggaaaaa
atgtttgaaacacagccgccaattgtctcagacgaggataaatgccagtccatattttcc
gccgtcgtcgtctacatgaagcacctcggcgtcaagagcagagcagtggataagaagtcc
agaggtggcttcttcagaaggcaactggttaagaataagaaggatgagtccacaaaggcc
aagcccagaggtgtctttccaggcatccccagctggattgcaggcaacactgaggtcaaa
cctaaaatggaaactgaagtggaaaaggataaacagaatcaggatcgtaagggtccagct
cctggcagagtttcgctgaccgacatcgcagctccgtcagcaccgagcaagaaatcggga
tccaccggtagcttcgtctctgtgcctgtggtcgacgttaacgaaacctcaggcaacaat
gtcagctccaccaacatccccgaggcgtcgcataatgatggtgtctcgagcacacgttta
gagccccctgtcctgtgcgatgggggcgatgtgtcccctgtgacgccggtgggcgtgctg
accattggggagcccatatctcccattgacctgagcacagatgaagttgttgacagtgtg
gaaggaccactcctagttgtcgaagggcctgcccactccccgaccagcccgtccccacaa
ctggaagaggtggacccacgccttctggagtttgagcaggacccagccaactggagggag
ctggcctcccctgaagctctggctaccctgagcaagaaggagatcaagagacaggaagtc
atcaatgagttgtttgcaacagagcatgcccatgtacgaatgctcagcgttcttcagacg
gtcttctctaagcccatggagagagtggcgctgctgaccgctacggaggttgccaccatc
ttccccaatttggatgagatcattgatatgcactataatttccacgagaacctgaagaaa
cgtcgtttggaggacaacttcattatcaagtccatcagcactacagtgcagaacaggttt
gatggtactgagggagagtggttccagaagttgacggcacgtttctgcagtcaccagtca
tgggctctggagcagatcaagatcaggcagaaaaaggatccacgtttcaactcatttata
caggagtcagaaagcaagcctcagtgccgtaggctgcaactcaaggacatcattccaata
gagatgcagagactcaccaagtaccctctactgctggagaatatagctaagaacacagag
aacaccgtagaaaaggagagaatcaagcagagcgcagagtgctgcagaaagatcctcaac
catgtcaacgaagaggtcaaagtgatggagaattttctgaccttgaaggactaccagcgt
cggctggacacatcagggcttaaaccaagcaatgaactttacacagagtataagaacatt
gaccttactcagaaaaagatgctttatgaaggacctctaatctggagagtcacaaaagaa
aaaggaattgaggtgcactgtgtgctactgtgtgacctgctggtgctcctacaaaaacaa
gatgacaagatggtcctcaaatgtcagagcaagagtacgattgccgtgcaggagggcaaa
cagatgctgagccctattataaagctggactctgtctttctccgggaggtggccacagat
cgaaaggccttctatgtgatcttcacctgggagagtggagcgcagatctatgagctggtg
gctcagtctgtgggagagagaaaaatttggactgatgtaataaagacagcagtggatgat
ctaaagaaaagtgtacccgtgaagcccgtactgcctgaagtgccgcacatttacccgcca
agaccaatagtgagcctgggtgaaaatggaagcttgaaaagaagcagtgtcttgtgtctg
cccacagatcaagacaaggatagcctgacagatgacaagtcttctgacctcagacacagg
ctcatcgatttcctgtctgagaagggctttgacctcctaggtcactccaacagcgatcag
gagaaaattgctggcgttgctttagaagaagtgatgtcgctgaaaagactcctggtcggc
agcatcagtctttcagaggactcgcagggtgacgaagaaaatggagaggagcagtccgaa
ctggacagctgtcactcaacagacaaaagccagagcacggagagagggggagaagaagag
agtgacgacattagtgaaaaagaggccaaatcagaggatgaaaggagcatcagcgcgccc
atggtgttgtcaccggagaggatggaggaagtacacaggcggctccgaagtctagagcaa
caactcaagaggttacagaatgtggaggaggaacaccacagactgcaggaggttctttct
caattctccttggagggagtgaacttccagtaa
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