Cynoglossus semilaevis (tongue sole): 103389242
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Entry
103389242 CDS
T04866
Symbol
rpgr
Name
(RefSeq) X-linked retinitis pigmentosa GTPase regulator
KO
K19607
X-linked retinitis pigmentosa GTPase regulator
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csem03037
]
103389242 (rpgr)
Cilium and associated proteins [BR:
csem03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103389242 (rpgr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
103389242
NCBI-ProteinID:
XP_008322793
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All DBs
Position
14:4499494..4508549
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AA seq
1101 aa
AA seq
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MAGESEDEIPESGAVFTFGKSKFADNVPSKFWLKNDIPCKIACGDEHTALITENGKLFMF
GSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHTLISTAKGKVYASGGNSEGQL
GLGHCEERTSFQHLDFFDSHGPIKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLGKESH
SSLPQEVGVGKPVNWVSCGYYHSALVTVDGALYTFGERDSGKLGLGTEQLSKHRVPQQVK
TIKGRVTQVMCGGGHTVALTEDEVYTFGLGQFGQLGHGTFIFESRVPRLVEHFKKGHVSH
VDCGENHTALITDEGLLYTFGDGRHGKLGLGEENFANQFKPTLCPRFLEYHVQLAVCGGC
HMVVLARPRDQNRSDTVTLEQDDVTEDPLEKPYVELLGDTGGLSTLQRSLSARVRRRERD
RSPDQFGAVPLRLVPPELSHRKLTNGSHRAERVEPQQQVQTEGDRDSAVESLSDTESVKG
LGETTDFLNMTHVMKMDPEDKSLSLSPVQKRRVKHGKATVDKQMKESGLLRGSTLSSTSL
SRKSEAESLCCRLGAESPLSLSASASQKAVRRNREKRSQDMGKSKVIEVVKRQKTDSGES
SGTKETAASVKGKARVGGSEDVEERSGEGRSFQVPRGQKSSKSKTDLSKKNKNEKNKKAA
ESVKSSPLQKTTLGLGLLAGAASLAAGAALASRTHTSSMSSPPSEVRSSVVVDRVRDFNN
LDSDSCAADLSRKSEVNEGVINAPDSPGGRSQEESEEHKRSEVVRQIEEERKDDEGQRTS
ADVSEVEEEEEEKEEEEKWSQKSDTDTRDEEEEEEGSKATGSESEEESKDIDSKSVVVGE
EEEEDKSGAEEEEEEEEEEESKATGSERGDQSEVRSDVEEEEEDEDSKDTGVENEEEGEE
ESEDEEEESDVATVDKEEEAKSDSSTQDEGEEEEEESGNESESAESKNECEEEEEEEEEV
EETDAEKESEGEEDEEEEEEEESENAEESEEESDSEEKGEEEEGEEEEEEEEEEEEKEEE
EEEEDEEEEDDEEEEDEQEEEEDEEKEEEEEEEEEEEEEKKGKKQSAKFKQKHRSGVKGQ
RRGEESEEFWGDVLPQYLNLK
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggagagtgaggacgagataccagaatcaggagctgtttttacttttggaaag
agcaaatttgctgacaatgttcctagcaaattctggttaaaaaatgacattccatgcaaa
atagcctgtggtgatgaacacactgccttaataacagaaaatgggaaactcttcatgttt
ggtagcaacaactggggccaactgggtctgggatccaaagtgactgtgaacaagcccacg
tgtgtcaaagctctgaagtctgagaaagttcagctggtggcctgtggaagaaaccacacc
ctcattagcaccgctaaaggaaaagtgtacgcctctggggggaacagtgagggtcagttg
gggctgggtcactgtgaggagaggacatcgtttcagcacctcgacttctttgattcacat
gggccaatcaaaatgctggctgctgggtccaacacgtcagctgctcttactgagagcggt
aagctgttcatgtggggggacaacacagagggtcagatcggtttggggaaggagagtcac
tcgtctttgccacaagaggtcggtgtgggaaaaccggtcaactgggtgtcctgtggatac
taccactctgccttagtcacagttgatggcgctctgtacacgtttggtgagcgagacagc
ggtaaactaggcctgggtacagaacagctctccaaacacagagttcctcagcaggtgaag
accatcaaggggcgtgtgactcaggtgatgtgtggaggaggacacaccgtggctctgaca
gaggacgaagtgtataccttcggcctgggtcagtttggtcagctaggtcacggcacgttc
atttttgagtctcgggtcccccgtctggtggaacacttcaaaaaaggacacgtcagtcat
gtggactgtggggaaaaccacaccgctctcatcactgatgaaggtctcctgtacaccttt
ggagatggcagacatggaaaactgggacttggagaagagaattttgcaaaccagttcaaa
ccaactctgtgtccacgtttcctcgaataccacgttcaattagctgtgtgtgggggatgt
cacatggtggtcctggcacgaccccgggatcagaaccgcagtgacactgtgactctggag
caggacgacgtgacggaagatcccctggagaagccatacgtggagctgctgggagacacg
ggtggcttgtccaccctgcagagaagtctctctgccagggttcgaaggagagagagggat
agatctccagatcagtttggtgcggttcctcttcgactggttccacctgagctgagccac
aggaagctgacgaacggcagccacagagcagagagagtggagcctcagcagcaggtgcag
acagagggcgatagagatagtgctgttgagagtctgagtgacacagagagcgtcaaagga
ctgggcgaaaccacggactttctcaacatgacacatgtgatgaagatggatcctgaagac
aagagtctgagcctgtctcctgttcagaagaggagagtaaaacacggtaaggccacggta
gacaagcaaatgaaagagagcggtctcttaagaggaagcactctctcttccacgtccctg
tctcgcaagagcgaagccgagtcactttgctgtaggttaggtgcagagagtccactgagc
ctcagtgcttcagccagtcagaaggcagtgaggcggaacagggaaaagcgatcacaggac
atgggtaaaagcaaagtaattgaggttgtcaagaggcagaaaacagattcaggcgaaagt
tctggaaccaaggaaacagcagcaagtgtgaaaggtaaagcaagggtgggagggagcgaa
gatgtagaggagagatcaggggaggggaggtcatttcaggttccacgggggcagaagagc
tcaaaatctaaaacagatttgtccaaaaagaacaagaatgagaaaaataaaaaagcagca
gagtcagtgaagtcaagtccacttcagaagacgactctgggcctcgggctcctcgctggt
gccgcctcgctggcagctggagcagctctggcctccagaacccacacctcctccatgtct
tctcctccttctgaggttagaagcagtgttgtcgtagacagagtgagggacttcaacaac
cttgactccgattcatgtgccgcagatctcagccggaaatctgaagtcaatgaaggagtg
ataaatgctccagatagccctggaggaaggagtcaggaggagagtgaggagcacaaacgg
tctgaggtggtcagacagatagaggaggaaagaaaggacgatgaagggcagcgaacgagt
gcagatgtaagtgaggtagaggaggaagaagaagagaaggaggaagaggagaaatggagt
cagaagtcagacactgacaccagggatgaggaagaggaggaagaaggtagtaaggcaaca
ggaagtgaaagtgaggaggagagtaaagatatagacagcaaaagtgttgttgtaggagag
gaagaggaggaggacaagagtggtgctgaggaagaagaagaagaagaagaagaagaagaa
agcaaggcaacaggaagtgaaaggggagaccagagtgaggtgagaagtgatgtagaggag
gaggaagaagacgaagacagtaaagacacaggggtggaaaatgaagaggagggcgaggag
gaaagtgaggatgaagaagaggagagtgatgtagcgactgtggacaaggaggaagaggca
aaatcagatagtagcacccaggatgaaggggaagaggaggaggaggaatcagggaatgaa
agtgagagtgcggagagtaaaaatgaatgtgaggaggaggaagaagaagaggaagaagtg
gaggagacagatgcagaaaaggagagtgaaggagaggaagatgaagaagaagaagaggag
gaggaaagtgagaatgcagaggagtcagaggaagagagtgatagtgaagaaaagggggag
gaggaagagggggaggaagaagaagaggaggaggaagaggaagaagaaaaagaggaggag
gaagaagaagaggatgaggaggaggaagacgatgaagaagaagaggatgagcaggaagaa
gaagaggatgaggagaaagaagaagaggaggaggaagaggaggaagaagaagaagagaaa
aaaggcaaaaaacaaagtgcaaaatttaaacagaagcacaggtcaggggtgaaaggtcag
aggagaggagaagagtcagaggagttttggggagatgtcttacctcagtacctcaacttg
aaataa
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