Cynoglossus semilaevis (tongue sole): 103391032
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Entry
103391032 CDS
T04866
Symbol
col23a1
Name
(RefSeq) collagen alpha-1(XXIII) chain isoform X1
KO
K24355
collagen type XXIII alpha
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csem00536
]
103391032 (col23a1)
Glycosaminoglycan binding proteins [BR:
csem00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103391032 (col23a1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
103391032
NCBI-ProteinID:
XP_016895094
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Position
15:11204438..11336969
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AA seq
505 aa
AA seq
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MPKTRTARDVGQECSCPPGPPGKRGRMGRRGEPGPPGKSGRDGYPGPLGLDGKPGLPGLK
GSQGPAGPKGEKGDQGVTGPRMVFPRYDHGFITGEQSSSFQRRFLKGDQGQAGPAGPPGP
PGPPGPRGPPGNTGKDGPRGPSGEQGFPGRDGAEGQQGLPGKPGDDGTPGYPGPQGPAGT
KGEPGFGEKGERGMDGLPGIKGDKGEAGLQGQQGPMGYPGEKGEAGSSDIIDFNGKLLDA
FQAINTISVSGPPGPPGLPGPPGEKGELGLPGPAGVDGEKGPKGDYGETGPPGERGEKGE
MGLSGPAGVDGHKGEKGDCRLDDNLVQMISQPGLPGPPGPPGMPGSPGSMGLHGMPGPKG
EPGVGMKGERGEPGPSGPRGLDGQQGITGSQGLVGLPGAKGEKGRPGEPGLDGFPGMMGD
KGERGERGEKGDRGSVGKRGPKGHKGEQGPPGLDQPCPVGCDQTKGLSAVLASPAPPPPP
LPPSGPKAPCPLGPDGLPIPGCWHK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaacaagaacagcaagggacgtcggccaagagtgctcctgtcctccagggcct
ccaggaaaacgtggaaggatgggacgaagaggagaacctggacctcccggcaagtctgga
cgggacggatacccgggtcctcttggcttggatggaaaaccaggtttacctggtctgaag
ggcagccagggaccagcgggacccaagggagaaaagggtgaccaaggtgtcactgggcca
cggatggtctttcctcgctatgaccacggctttataaccggagagcagtccagcagcttt
cagagacgctttctgaagggtgaccagggtcaggctggacctgcaggtcctcctggtccc
cccggccctcctggtccccgcggcccccctggaaacacgggcaaagatggaccccgtggc
cctagtggagagcagggttttccaggccgtgatggcgccgagggacaacagggattacct
ggaaagccgggagacgatggtacgccaggttatccagggccacagggtcctgcagggaca
aagggcgaacctgggtttggagaaaagggagaaagaggcatggatggacttccagggata
aagggtgataaaggtgaagctggattgcagggacaacagggacccatgggttatcctggt
gaaaaaggtgaagcaggttcttcagacatcattgacttcaatgggaaactcctggacgct
ttccaggccatcaacaccatcagtgtttcgggcccgcctggaccacctgggctcccgggc
cctccaggggagaagggtgagcttggtttacctggtccagctggagtggatggggaaaag
ggtcctaaaggtgactacggtgagacaggaccaccaggagagagaggggagaagggagag
atggggctgtctggacctgctggtgtggacggacataaaggagagaaaggagactgtcga
ctggacgacaacctggttcagatgatttcccaaccaggtctacctggtccacctggacca
cctggaatgcctggatctcctggctctatgggtcttcatggaatgcctggtcctaaggga
gagcctggagttggcatgaagggagaaaggggagagcctggtccatctggacccagaggc
ctagacggccagcagggtataactgggtctcaggggttggtgggtctgccaggtgcaaag
ggagaaaaagggagaccaggagagcctggacttgatggtttccctggaatgatgggagat
aaaggggaacgaggagaacgaggagagaagggtgacaggggatctgttgggaagaggggt
cccaagggccacaagggggagcagggtcctccaggcttggaccagccttgccctgtgggc
tgtgaccagactaaaggtctttctgctgtgttagcttctccagctcctcctcctcctcct
cttcctccttccggccccaaggccccctgtccactgggaccagacggtttgccgatacca
ggctgctggcacaagtga
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