KEGG   Cynoglossus semilaevis (tongue sole): 103396409
Entry
103396409         CDS       T04866                                 
Symbol
vim
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:csem00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103396409 (vim)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103396409 (vim)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csem04812]
    103396409 (vim)
   04147 Exosome [BR:csem04147]
    103396409 (vim)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     103396409 (vim)
Cytoskeleton proteins [BR:csem04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     103396409 (vim)
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103396409 (vim)
  Exosomal proteins of other cancer cells
   103396409 (vim)
SSDB
Motif
Pfam: Filament Filament_head TolA_bind_tri bZIP_1 DUF1664 ACCA DUF4407 HALZ Jnk-SapK_ap_N
Other DBs
NCBI-GeneID: 103396409
NCBI-ProteinID: XP_008332705
UniProt: A0A3P8VZH4
LinkDB
Position
20:complement(9109219..9113874)
AA seq 456 aa
MSFSSPRHSSYRKMFSGDKVALRSYSSRQYSSPALRSSSRGTLSVSSAPTVYAAKTQRLR
SSSAMPRLASENLDFSLSDAINTEFITNRTNEKAQMQSLNDRFANYIDKVRFLEQQNKIL
LAELEQLRGKGTTRVGDLYEDEMRELRRQVDQLTSEKARVEVHRDNLVDDVDRMREKLQD
EIAQREEAESNMHSFRQDVDNAALARLDLERKVDSLQEEINFLKKLHDEEMLELQNQIQQ
QQHVQVDMDLAKPDLTAALRDVRLQYENLATKNIHESEEWYKSKFADLNDAAARNTDALR
LAKQEANDYRRQIQALTCEVDALKGSNESLERQMRELEENFSQESNGYQDTIGRLEEDIH
NMKDEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISAPLPNLSALSLRESMHEA
KPHAEATTTRKVLIKTIETRDGQVINESTQNHDDLE
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgtcgttctcctcaccgcgacattcctcctacagaaagatgttcagtggagacaaggtg
gcgctcaggagctactccagccggcagtactccagccctgcactgcgctcctcctccagg
gggaccctgagcgtttcctctgccccgaccgtttacgcagcaaagacccagaggctgcgg
agcagctcagccatgccccggctggcctccgaaaacctggacttctctctgtccgacgcc
atcaacaccgagttcatcacgaaccgcaccaacgagaaggcgcagatgcagtcgctcaac
gaccgcttcgccaactacatcgacaaggtgcgcttcctggagcagcagaacaagatcctg
ctggcggagctggagcagctgaggggcaaaggcacgacccgggtgggcgatctgtacgag
gacgagatgcgggagctgaggcgtcaggtggaccagctgaccagcgagaaggcccgtgtg
gaggttcaccgggacaacttggtggacgacgtggacaggatgagagagaagttgcaggat
gaaattgctcagcgagaagaggctgagtcaaacatgcacagcttcagacaggatgttgac
aatgctgccctggccagactggaccttgagcggaaggtggactcactgcaagaggaaatc
aacttccttaaaaagctgcacgatgaggaaatgctggagctgcagaatcagatccagcag
cagcagcatgtccaggtggacatggacttggctaagcctgacctgacagctgctctgagg
gacgtccgtctgcagtacgagaacctcgccaccaaaaacatccatgagtctgaggaatgg
tacaaatcaaagtttgctgacctcaatgacgcagcagccagaaataccgacgctttgaga
ctggccaagcaggaggccaatgactacagacgtcaaattcaggctctcacttgtgaagtg
gatgcccttaaaggaagcaatgaatccctggagcgtcaaatgagagaactggaggaaaac
ttctcccaggagagtaacggttaccaggacaccattggccgtttagaagaggacatccac
aacatgaaggacgagatggcccgtcacctgcgggagtatcaggagctcctcaatgtcaaa
atggctctggacattgagattgccacctacaggaagctgctggaaggagaggagagcaga
atctctgctccactgccgaacctttcagccctcagcctgcgagaatcaatgcacgaagcc
aaacctcacgctgaagccacaacaacaagaaaggttctcatcaagaccatcgagaccagg
gatggtcaggtgatcaacgagtcaactcagaatcacgatgacctggagtag

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