Cynoglossus semilaevis (tongue sole): 103396409
Help
Entry
103396409 CDS
T04866
Symbol
vim
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103396409 (vim)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103396409 (vim)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csem04812
]
103396409 (vim)
04147 Exosome [BR:
csem04147
]
103396409 (vim)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
103396409 (vim)
Cytoskeleton proteins [BR:
csem04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
103396409 (vim)
Exosome [BR:
csem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103396409 (vim)
Exosomal proteins of other cancer cells
103396409 (vim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
TolA_bind_tri
bZIP_1
DUF1664
ACCA
DUF4407
HALZ
Jnk-SapK_ap_N
Motif
Other DBs
NCBI-GeneID:
103396409
NCBI-ProteinID:
XP_008332705
UniProt:
A0A3P8VZH4
LinkDB
All DBs
Position
20:complement(9109219..9113874)
Genome browser
AA seq
456 aa
AA seq
DB search
MSFSSPRHSSYRKMFSGDKVALRSYSSRQYSSPALRSSSRGTLSVSSAPTVYAAKTQRLR
SSSAMPRLASENLDFSLSDAINTEFITNRTNEKAQMQSLNDRFANYIDKVRFLEQQNKIL
LAELEQLRGKGTTRVGDLYEDEMRELRRQVDQLTSEKARVEVHRDNLVDDVDRMREKLQD
EIAQREEAESNMHSFRQDVDNAALARLDLERKVDSLQEEINFLKKLHDEEMLELQNQIQQ
QQHVQVDMDLAKPDLTAALRDVRLQYENLATKNIHESEEWYKSKFADLNDAAARNTDALR
LAKQEANDYRRQIQALTCEVDALKGSNESLERQMRELEENFSQESNGYQDTIGRLEEDIH
NMKDEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISAPLPNLSALSLRESMHEA
KPHAEATTTRKVLIKTIETRDGQVINESTQNHDDLE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctcctcaccgcgacattcctcctacagaaagatgttcagtggagacaaggtg
gcgctcaggagctactccagccggcagtactccagccctgcactgcgctcctcctccagg
gggaccctgagcgtttcctctgccccgaccgtttacgcagcaaagacccagaggctgcgg
agcagctcagccatgccccggctggcctccgaaaacctggacttctctctgtccgacgcc
atcaacaccgagttcatcacgaaccgcaccaacgagaaggcgcagatgcagtcgctcaac
gaccgcttcgccaactacatcgacaaggtgcgcttcctggagcagcagaacaagatcctg
ctggcggagctggagcagctgaggggcaaaggcacgacccgggtgggcgatctgtacgag
gacgagatgcgggagctgaggcgtcaggtggaccagctgaccagcgagaaggcccgtgtg
gaggttcaccgggacaacttggtggacgacgtggacaggatgagagagaagttgcaggat
gaaattgctcagcgagaagaggctgagtcaaacatgcacagcttcagacaggatgttgac
aatgctgccctggccagactggaccttgagcggaaggtggactcactgcaagaggaaatc
aacttccttaaaaagctgcacgatgaggaaatgctggagctgcagaatcagatccagcag
cagcagcatgtccaggtggacatggacttggctaagcctgacctgacagctgctctgagg
gacgtccgtctgcagtacgagaacctcgccaccaaaaacatccatgagtctgaggaatgg
tacaaatcaaagtttgctgacctcaatgacgcagcagccagaaataccgacgctttgaga
ctggccaagcaggaggccaatgactacagacgtcaaattcaggctctcacttgtgaagtg
gatgcccttaaaggaagcaatgaatccctggagcgtcaaatgagagaactggaggaaaac
ttctcccaggagagtaacggttaccaggacaccattggccgtttagaagaggacatccac
aacatgaaggacgagatggcccgtcacctgcgggagtatcaggagctcctcaatgtcaaa
atggctctggacattgagattgccacctacaggaagctgctggaaggagaggagagcaga
atctctgctccactgccgaacctttcagccctcagcctgcgagaatcaatgcacgaagcc
aaacctcacgctgaagccacaacaacaagaaaggttctcatcaagaccatcgagaccagg
gatggtcaggtgatcaacgagtcaactcagaatcacgatgacctggagtag
DBGET
integrated database retrieval system