Cynoglossus semilaevis (tongue sole): 103398058
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Entry
103398058 CDS
T04866
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1-like
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103398058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103398058
Membrane trafficking [BR:
csem04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103398058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
ATG16
ADIP
Motif
Other DBs
NCBI-GeneID:
103398058
NCBI-ProteinID:
XP_016898729
LinkDB
All DBs
Position
2:complement(9771294..9785733)
Genome browser
AA seq
1506 aa
AA seq
DB search
MAMATGATVAESQLHRIIRDLHEAVTELAKEYRETGEPITDDSTNLHKFSYKLEYLLQFD
QKEKSTFLGTKKDYWDYFSDCLAKIKGANDGVRFVKSITELKTSLGKGRAFIRYSLVHQR
LADTLQQCLMNQRVTSDWYYARSPFVKSHLSADIINHLYELNEVQFDVASRGHDLDASWP
TFARRTLANSPGHMWKPPSRSSSINSLVSTYSQQAHEFPSSPDYGHNLLTDLNESLPVCP
EDMSTVDDLRLELDQSELKQQQLLDNVQQLGEEAAELRGIVVELQKQLDVSLAAQEEQQV
LQVEVRGLQEREQSLSKEVERLNTKEKAMEDEQRLLKQSLAAADTKNVELLAKLDGVLNE
KGQQAASYFNSAQKIHELLDKLKEAERGKMEAVAEAESKKRLGERLETELKLKEAAAREG
ETKLGALVTSTSEEKMKLMAKVEEQSSALDKLQGSLTQREKEANNLQKQLRDLQKSLEEA
EKEVEMVKRMAQEDKERMHMNVNDLKKMLEAEVSSFKEEVEKKEEELTSTFETLQQLRTQ
NQSLNTEREKLTNTQAELEANVKELTTRMEECKTQCTNLTDLNEKLLTTVRKNEELKEEM
DENRGALEAEVSALRASEKQLRGQLDDTKLTVDEKEKLLREENCKLDESLQRATMAASTA
ESTSKRLQXENKSLKEEQDSVKTALGKMQADLKSVHGQIAELEKNLGASRKNEGDLQEQL
KTKEDLLVNKEVQLKTLQSKVKALIAKEKELEIARADAEATLAKQAELIQRVTCEKQAME
MSQLERSAVQEKENQEIIGKLAVVESQLELSMKDVSRLQAETLDLRVKGQRSEEEKLTFQ
AQLEVTEAQRDELRILTEQLKSQTEALNQKHIEELMECQKKEEKLMEKHNREMASHAESA
LSAAAVQDELSSLKALYNKLVLENTEIREGLHRANTEMAELGMTICKLSAEKEEATQLWT
SDTARIAELEKEVERGEECVTELRQENYQIRQELIKKESLLENIVELQEQLEKSKDLVQN
VKESNKEEMEAIKFQMSSENMNHQNQMKSVTEQLNKVKTQLQEELKRVNNLQTEVSELKV
ENEQFLLLVGEKDAHITKAEATIRESESEIQQLREAVNRVEEAHTSAQMGCEELEQKLNK
ANTELQSQSLKLTAEIDDLNRTKTNLEERLIELIRDKDALWQKTDALEFEQKLRAEERWW
LMDKEATHCLDCQGQFTWFLRRHHCRLCGRIFCYYCSNNFVMTKQSGKKERCCKECYTQH
TAVVERFTEAELSPADTQPPPDGAGPQPPPEPAPYTPTPRVTVSESGIRSDDGAFDIITE
EEVNGVYDSDTNSQTTGGSLDGEQDRPPPGALNIGLGDNAEDHSEITLLKSGEVTMVVPL
SIDGISQFGDGSRELFIKSSCYSVLTVDMRDCGQTISWMFSSEPKSISFSVVYQESADTP
VEQTKVLIPLTRCNSHEETVQGQLKVRHPGHYILIFDNSFSRFISKKVFYHLTMEKPVIY
DGSDCS
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggccatggctacgggggctactgttgcagagagtcaactccacaggattatcagagat
cttcatgaggcggttacagaacttgctaaagagtacagggaaactggggaaccaatcaca
gacgacagcaccaacttgcacaaattttcctataagctggagtacctgctacagtttgac
cagaaagagaaaagcacatttcttggaacaaagaaggattactgggactactttagtgac
tgtctggcaaagatcaagggtgccaatgatggggttcgcttcgtcaaatccatcactgaa
ctgaagacatctctcggaaaaggacgtgcctttattcgttattctcttgtgcatcagcga
ctggctgatacactgcagcagtgcctgatgaaccaaagagtcaccagtgactggtactat
gcaagaagccctttcgtgaagtcccaccttagtgctgacatcatcaatcacctgtatgag
ctcaatgaggtgcagtttgatgtggcttccagaggacatgatctcgatgcctcgtggcct
acttttgccaggaggacacttgcaaattcacctggccacatgtggaaacctccaagtcgc
agttccagcattaacagtctggtcagcacctattcccagcaagcgcacgagttcccctct
agcccagactatggtcataatctcctgaccgacctgaatgagtccttgcctgtctgtcct
gaagacatgagcacagttgacgaccttcgtctagagctggaccagtcagagctgaagcag
cagcaactcttagacaatgtgcagcagctgggtgaggaggctgctgaactcaggggcata
gtggtggagctgcagaaacagttagatgtctcacttgctgcacaagaagaacagcaagtt
ttgcaggtagaagtcagagggctgcaggagcgggaacagtctctgtccaaagaggtggaa
agacttaataccaaagagaaagccatggaggatgaacaacggctgctcaagcagagcttg
gcggctgctgatactaagaatgtggagctcctggctaagttagatggggtactaaatgag
aagggccagcaggctgccagctactttaattcagcacaaaaaatacacgagttgctcgac
aaattaaaagaggcagagagaggaaagatggaagctgtagccgaagctgagtcgaaaaaa
agactgggggaaaggttagagactgagctgaagttaaaggaggcagctgctagagagggt
gaaaccaaattaggagcattggttacatctacatctgaggagaaaatgaagttgatggca
aaagtggaagaacaatccagtgccttggacaaactccaggggtctttgacacagagggag
aaggaggcaaacaacttacaaaagcaactgcgagatttacaaaaatccctcgaagaggca
gagaaggaagtagagatggtgaaaagaatggcacaagaagataaagagagaatgcacatg
aatgttaatgatttaaaaaagatgctggaagcggaagtctcctctttcaaagaagaggtt
gaaaagaaagaagaggaactaacttctacctttgagacactacaacagctgaggacccag
aaccaaagtttaaacacagaaagagagaagctgacaaatactcaggcagagctggaagct
aacgtcaaagaactgactaccaggatggaagagtgcaagacacagtgcactaatttaacg
gatctgaatgagaagctgctgactacggtaaggaaaaatgaggagttgaaggaggaaatg
gatgaaaacagaggagcacttgaagctgaagtatctgctctgagagcttctgagaaacaa
ctgcgaggacagctggatgacactaaactgacagttgatgaaaaggagaagctgctgcgt
gaggagaactgtaagttggatgagagcttgcagcgggccaccatggcagccagcacggca
gagagcacatcgaagaggcttcagnaggagaacaagagtctgaaggaggagcaggactct
gtgaaaactgctctgggtaaaatgcaggcagacctgaagagtgttcacggacaaatcgca
gagctggagaagaatttgggagcgtcgcgtaagaatgagggcgatctgcaagaacagctc
aaaacaaaagaggacctgttagtaaataaagaggttcaactcaaaacgcttcagtccaag
gtgaaagctttaattgccaaggaaaaagagcttgaaatagccagagctgatgcagaagcc
acccttgcgaaacaggcagaattgatccaacgagtgacctgcgagaagcaggcgatggag
atgtctcagctagaaagaagtgctgtccaagaaaaggaaaaccaggaaataataggcaaa
ttggctgtggttgagagtcagttagagctaagtatgaaagacgtgtccaggctgcaggcg
gaaactttagacctgagggtgaagggccaacggtctgaggaggaaaagcttacatttcaa
gcacaactggaagtaaccgaggctcagagggatgagctcaggattttgactgagcagctg
aaatctcagactgaagctttgaatcagaagcacattgaggagcttatggagtgccaaaag
aaagaagagaagttgatggaaaagcacaatagagaaatggcttcacacgctgagtcagca
ctatcagcagctgcagttcaagatgagctgtccagcctgaaggcactatacaacaagctt
gtgttggagaacacagagatacgtgagggcctgcacagagcaaacacagagatggcagag
ttgggaatgaccatatgtaagctgagtgcagaaaaagaagaggccacacagctatggacc
agtgatactgccaggatcgcagagctagagaaagaagttgagcgaggagaagaatgtgtg
acagagctacggcaggagaattaccaaataagacaggagttgattaagaaagagtcactc
ttggagaatattgtggagctccaggagcagctggaaaaatccaaggacctggtgcagaat
gtcaaagagtccaacaaagaggagatggaggccataaagtttcagatgagctcagaaaac
atgaaccatcagaatcagatgaagagtgtgactgaacagttgaacaaggtgaaaactcaa
ctacaggaggagctgaagagagtaaacaacctgcagactgaagtgtctgaactaaaggtt
gagaatgagcagtttttgctgctagttggggagaaagatgcccacatcacaaaagcagaa
gcaaccatcagagagagtgaaagtgagattcagcagctgagagaagcagtcaacagggtt
gaggaagcacacacatctgctcaaatgggatgtgaggaattggagcagaaactcaacaaa
gcaaacacagagctgcaaagccagagcctgaaactgactgcagagatagatgacctaaac
aggaccaagaccaacctcgaagagagactgatagagctcatcagggacaaagatgctctg
tggcagaagacagatgctctggaatttgagcagaagctgcgagcggaggagcgctggtgg
ttgatggataaagaagccactcattgtctggactgtcagggccagttcacctggtttctg
cgcagacatcattgcagactctgtggtcgcatcttctgctactactgcagcaacaacttt
gtgatgaccaaacaaagtgggaagaaggagcgatgctgcaaggagtgttacacccagcac
actgcagtggtggagagattcacagaagcagagctcagtcctgcagatacacagcctcct
ccagatggagcgggacctcaacctcctcctgaaccagctccgtacacacccacccctcga
gtgacagtttctgagtctggtatcagatctgatgatggagcatttgacatcatcaccgaa
gaagaggtgaatggtgtctacgacagtgacaccaactcccagaccaccggaggctcactg
gatggagaacaagacagacctcctcctggggcattgaacataggcctgggagataatgct
gaagaccattcagagattacccttcttaaatcaggagaagtcacgatggttgttcctctc
agcatcgatggtatttctcagttcggagatggttccagggagctcttcatcaagtccagc
tgttacagcgtgctaaccgttgacatgagagactgtggccagaccatcagctggatgttc
tcctctgagcccaaaagcatctccttcagtgtggtttaccaggaatctgctgacactcca
gtggaacagacgaaggtgctgattcctctgactcgctgcaattctcatgaagagacagtt
cagggtcagctcaaagtccgtcaccccggtcactacatcctcatctttgacaactccttt
tcacgatttatctccaagaaagtattctaccacctgaccatggagaaacctgttatctat
gatgggagtgactgttcctga
DBGET
integrated database retrieval system
