Cynoglossus semilaevis (tongue sole): 103399983
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Entry
103399983 CDS
T04866
Name
(RefSeq) rootletin-like
KO
K16469
rootletin
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csem03037
]
103399983
Cilium and associated proteins [BR:
csem03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103399983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
ATG16
Motif
Other DBs
NCBI-GeneID:
103399983
NCBI-ProteinID:
XP_016895948
LinkDB
All DBs
Position
2:complement(15418502..15456013)
Genome browser
AA seq
1914 aa
AA seq
DB search
MSFRWEPSADSPRLEAVIQKLEESFLQSDSSSEVTSFSVQDDGHDTDFRPLPASTRIHHS
ITRGAAELPPSERSEDGDQLGRRSLREPVCLSEMDYEHTPDKQTSVTDLVDQMLTLHAAD
SDQESVFLQNKERAYSQRLQLYQEAQGRQAQLVEKLQTKVLQYKKRCGELEELALEKTSD
LEKMRLLLQTHLDRAQRQQQTEQDLNTAIEKKCFQLEEEQKRCASLSRVNSVLREQLEQA
GTVNQELTESLWKVQEDVELWGNHLQKEQETRAPRLTREQPRVKVLWRQASSLQCSFTHL
RTFTDRTLSDMRGEFVAVRQQLRSVCMSLEARAVQNSTSSGAEISALEKQLRDKLKEALQ
HQSQWDTEKVRLNSRILELSDTVKHLRGRNNEKDASLAAAHVSLDTMEKRRTEDKADMKD
LRTEIQTLQKILSQVHKLVGGKGSDNSLAQPDWSALKNNTVMAVQSALSKHQKQAQDLRG
CLDAALEQVDDLRRHLQERDSEKRELELKVQEVLRESQEAKTSLAESIRDSSRYCRSLEL
ISSEKDSQEKLVSGLQQEVDSQRAELEALQGSSLELQRTQDFLMQQREDLEMQLTRQQTE
AQRGKSSLEELEEKHSQLRRELVTVKENLNQITLQKEVLEEDKASLSLAVSKLESQGSAQ
EVAITKLQSQEANLKNSLSKMVVLSKGLAKDKVELNRILLQKEGEKAELDERRREAEVER
AAAREETARVQQEIMNLLAEKQVLDSSHSHMHNLCQKLEAELSLLQREKTQALEQHSQVT
RQMQVISEELYVCKKELETKSTSLKRATQDREELAKEKAALDVNLNSTERKAYGLMQELV
ALRAEKESLEAALFESQAENTRIEEEKHGLLLTNEALTRDSACKRVEAEQQLAQAAEKEK
TLVEKLTQSERQARVTLNKMEEIHRDQLETERQKHERRCVELRFQWEQAEEQLRRQCQEQ
RVCSQQELQQVQEEQAKLQQDFNKRLLQAESEKQQALSQKEAEKAALTERFTALQHDLAT
AHSELEHTKRESLSKHEQDKNVIAALRYELKELRTEFEESLNSHENTKKSFAEQVRELNK
QREHAEKELEGLRQQTQAAQDALVKGQQELIELHRELQECAQERDRQRKEALDQRRLLGD
ESREREAVQSSNQELRVFVKRAESENKSLKRALEERNQKVAVLEECRSSMDQEANALRSS
VRDLEKTRLQARRDLQELRRQVKILESESSRQKQELQELQARLFQEERKEEEARREAFSL
RQKVLECEAGRDAALNEVAVLQCHLLEMESKEQQSQELLQEKEAFLQQSGQQHRDTYTQM
KDALENAKDQVRKLTARVVLSEQKCEALQRQLNQSEAKSKDLDLKLTRLCSAVRLTVHKD
GAGNVTGGTVLSISDGEEEELDIDAVHTILQEFQQEFREAQRKKDEAKSQVLSLSEQVSN
LTDSQHKSSSQILQLQDSLKQSETGRKEIEKQMRDLHLSLSFHKEVACRTEGEKRSLEEK
IATLRNSLQTAESESRVQQDKLELLQNLESHANMERRKLKESLEAAENRASSLELTQCTL
EGELHRARLRAAELDAESGALQERLMELRKKLEESEDQCAALRISEERLTLSLARNEQHE
GQLREQIHKLSQSLSDNRSGSEVLEEQMTQLHRALTCSEQDRRLLQERLDKMRDSLSESK
KLNHTLTEHNQNLERNNEDAGLKMSELEKQNSSLKEGLKQQQKAGVQAQGCSQQLQQEKE
ELQRKVNSLQGTLKKLQKDRGEMERVLCRLGKERSALRKTLEKVEMERLRKEEEATSAAK
EKERLGQMVQSLEQELADKLNEQQTLQDYVSKLERSHTQSLLEVTARHHHELDLETERLR
DSQLQAEEALEARERAHRQRVKCLEEQVLTLREELDQETRRRHQYINQMLQRSV
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaggtgggaaccaagtgctgattcaccacgactggaggctgtgattcagaaa
ctggaagaatctttccttcagtctgacagcagctcagaggtgacaagtttttcagttcaa
gacgatggacacgacactgattttaggcccttgcctgcctccacaagaatccaccacagc
atcacacgcggagccgctgagctgccacctagtgagagatctgaggacggtgaccagctg
gggagaaggtccttgagggagccagtgtgtcttagcgagatggactatgaacacacacca
gacaaacagaccagcgtcacagatctggttgatcaaatgctaacgctacacgctgcggac
tcagaccaagagagtgtgtttctacaaaacaaggagagagcttacagccaaaggttgcag
ctctaccaggaagcccagggcagacaagctcaactcgtcgagaagctgcagactaaggtt
ctacagtacaaaaagagatgtggagagctggaggagctggctctggagaaaacgtcagat
ttagagaagatgcgactgttgctgcagactcacctggacagagctcagcgtcaacagcaa
acagagcaggatctcaatactgctatagaaaagaagtgttttcagctggaggaggagcag
aaaaggtgtgccagtctcagccgggtgaactccgtgctgagggaacagctggagcaggcg
ggcaccgtcaaccaggagctaacggagagcttgtggaaggtccaagaagacgtggagttg
tggggtaaccatctgcagaaagagcaggagactcgtgcccctcggctgactcgtgaacag
ccccgtgtcaaagtgctgtggcgccaagcctcctccctgcagtgctcttttacgcatctg
aggacgttcactgacaggactctgtctgacatgcgaggggagttcgtcgccgtcagacag
cagctgaggtccgtgtgcatgagcttagaggccagagcggtgcagaacagcacctctagt
ggtgcagaaatctcagcgctggaaaagcagctgagggacaagttaaaagaggccctgcaa
catcagagtcaatgggatacagaaaaagtccgtctcaactccagaatcctggagctgtcg
gacacggtgaagcacctccgcggccggaacaatgagaaggacgccagcctcgcagccgcg
cacgtcagtctggacacgatggagaagaggagaacagaggacaaagcagacatgaaggac
cttcgcacagagatccagactctccaaaagattttaagccaagttcacaagttggttgga
gggaagggctctgataactctttagctcagcctgactggtctgctctgaagaataatacc
gtaatggctgtgcagagtgcactctctaaacaccaaaaacaagcacaggatctacgtggt
tgtctggatgcagcgctggagcaagtggacgatctgcgccgtcacctacaggagagagac
tcggagaagagggaacttgagctgaaggtccaggaagtgttacgggaaagtcaggaggcg
aagacatcgctggcggaaagcatccgagacagcagcagatattgccgctctctggagctc
atctccagtgagaaggacagtcaagagaagctggtgtcaggactgcagcaggaggtggac
tcccagcgtgccgagctggaggcgctgcagggctcctcgctggagcttcagagaacgcag
gacttcctgatgcaacagagggaggatcttgagatgcagctgacacgccagcaaacagag
gcccagagaggcaaaagtagcctcgaggagctggaagagaagcactctcagctgcgtagg
gagctggtgacagtgaaggagaacctaaatcaaataactctgcaaaaggaggttttggag
gaggacaaggccagtctttctctggctgttagcaagctggagtcacagggatcggcacag
gaagtagcaattaccaaactgcagagtcaggaagcaaatctgaaaaactctctgtccaaa
atggttgttctcagcaaaggcttggccaaagacaaagtggaactcaatcgcatccttctg
cagaaggaaggtgagaaggccgagctggatgagcgcagacgtgaagccgaggtggagcgg
gcagcggccagggaggagacggcacgggtgcagcaggagataatgaatctcctcgctgag
aaacaagtcctcgacagctcccacagccacatgcacaatctctgccagaagctagaggca
gagctaagcctcttgcagagggaaaaaactcaggccctggaacagcattcacaggtgacc
agacagatgcaggtcatttcagaggagctgtatgtctgcaagaaagagcttgaaaccaag
tccacctccttgaagagagctactcaggacagggaagagctggctaaggaaaaggctgct
ctggatgtcaacctgaactccactgaacggaaggcctacggcctcatgcaggagctggtt
gcactcagagcagagaaggagtccctagaggccgctctgtttgaaagccaggctgagaac
accaggatagaggaggagaagcacgggctgctcctgactaacgaggccttgacgcgtgat
tctgcctgcaagcgtgtcgaagctgaacagcagttggcacaggccgcagaaaaagaaaaa
acactggtggaaaagttgacccaatcggagaggcaagcccgagtgaccctgaacaagatg
gaagaaatacacagagatcaacttgagaccgaacgccagaaacatgagcggcggtgcgtg
gagctgaggtttcagtgggagcaggctgaggagcagctgcggagacagtgtcaggagcag
cgtgtgtgcagccagcaggagctgcaacaggtgcaagaggagcaggccaaacttcaacag
gactttaataaaaggcttctgcaggctgagagtgaaaagcaacaggctctgtcccagaag
gaggctgagaaggctgccctcacagagaggtttacagccctgcagcatgacttggccaca
gcacacagtgagctggagcacaccaagagggagtcactcagcaaacatgagcaggataag
aatgtaattgctgcccttcggtatgagctgaaggagttacggacggagtttgaagagtct
ttgaactcccatgaaaatacaaaaaaaagttttgccgagcaggtcagggagttgaacaaa
cagagagaacacgcagagaaggagttggaaggccttcgccagcagacgcaggccgcgcag
gatgcgctcgtgaaagggcagcaggagttaattgagcttcacagagaactccaagagtgt
gcacaggaaagggacagacaacggaaagaagctctggaccagagacgacttttaggagac
gagagcagggagcgagaggccgttcaaagctccaaccaggagctccgagtcttcgtcaag
agagcggagagcgagaacaaaagcctaaaacgagccttggaggagaggaatcaaaaagtg
gccgtgttagaggaatgtcgaagctccatggatcaagaggcaaacgctttacggagcagt
gtgcgagatctggagaagactcgtctgcaagcacgcagagacctgcaggagctgcgcaga
caggtgaagatccttgaaagtgagagcagccggcagaagcaagagctgcaggagctgcag
gctcgactttttcaggaggagcgcaaggaggaagaggcgcgtcgcgaggcttttagtctg
aggcagaaagtgctggagtgtgaggcaggaagagatgcagcactgaatgaggtcgcagtt
cttcagtgtcatctgttagaaatggagtccaaggagcagcagagtcaggagctgctgcag
gagaaagaggctttcctgcagcagagcggacaacaacatagggacacgtacacccagatg
aaggacgcgttagaaaatgccaaggaccaggtcaggaagttgaccgcacgggttgtcctg
agtgaacaaaaatgtgaagccctgcaacggcagcttaaccaaagtgaggctaagtctaag
gacctggatctgaagttgacccggttgtgttcagcagttcgcctcacagttcacaaagat
ggggccggtaacgtgacaggtggaaccgtcttgtctatatctgatggtgaagaggaggag
ctggacattgatgcagtacacacaattctgcaggaattccagcaggaattcagggaagca
caaaggaaaaaggatgaagccaagtctcaggtgctcagcctgagtgagcaggtgtcaaac
ctcacagacagccaacataagtcaagctctcaaatactgcaactgcaggactccttgaaa
cagtcagagactggtcgaaaagagatagaaaaacaaatgcgtgacctgcacctgtcgctt
tcctttcacaaggaagtggcttgtcgcaccgagggagagaaaagaagccttgaggagaag
attgcaacgctcaggaatagtctgcaaactgctgagtcagaatccagggtacaacaggat
aagttggagctcttgcagaacttggaatctcacgcgaacatggaacgtcggaagctgaaa
gagtccctggaggcggcagaaaacagagccagcagcctggagctgacgcagtgcacgctc
gagggcgaactgcaccgagcgcgactccgggcggcagagctggacgcggagtccggggca
ctgcaggaaaggctgatggagctgagaaagaagctggaggagagcgaggaccagtgtgca
gcgctgaggatcagcgaagagaggctgaccctgtcgctggctcgaaacgagcagcacgaa
ggtcaactgagagagcagatccacaaactgtcccagtcgctcagtgacaaccggagcggc
agcgaggtcctggaggaacagatgacccagctgcacagggctctgacgtgcagtgagcag
gacagaaggctgctgcaggaacgcctggataagatgcgagattccctctcagagagtaaa
aaactaaaccacacgctgactgaacacaaccagaaccttgagagaaacaacgaggatgcc
gggcttaaaatgtctgagctggagaaacagaacagttcactgaaggagggcctgaagcag
cagcagaaggctggagtacaggctcaaggctgctcccaacagctgcagcaagaaaaggag
gaactccagcgcaaggtcaacagtctgcagggcactttgaaaaagctgcagaaagaccga
ggcgagatggagagggtgctctgccgcctcggtaaagaaaggtccgccctcagaaaaacg
ttggagaaggtagagatggaaaggctgagaaaagaggaagaggcaacatccgcagccaaa
gagaaggagcgattgggacaaatggtacagagtctggagcaggagctggctgacaaactc
aatgagcagcagactctgcaggactacgtttcaaagttggagcgttctcacactcagtcc
ttactggaagtgacagcccgccatcaccacgagcttgatttggagacggagcgtttgcgg
gacagccagctgcaagcagaagaagcgctggaggccagggagagggcccatcgtcagagg
gtgaaatgcctcgaggaacaagtgttaactctgagggaggaactggatcaggagacaagg
agacggcaccagtatatcaaccagatgctgcagcgcagtgtttag
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integrated database retrieval system