Clostridium septicum: CP523_10285
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Entry
CP523_10285 CDS
T06069
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
csep
Clostridium septicum
Pathway
csep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CP523_10285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csep03400
]
CP523_10285
Enzymes [BR:
csep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CP523_10285
DNA repair and recombination proteins [BR:
csep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CP523_10285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
Helicase_RecD
PIF1
AAA_22
DNA_pol_lambd_f
ATPase_2
PhoH
nSTAND3
NTPase_1
AAA
SLFN-g3_helicase
HHH_2
AAA_23
UvrD-helicase
AAA_28
HerA_C
AAA_29
ABC_ATPase
T2SSE
Thymidylate_kin
AAA_12
AAA_5
ATP_bind_1
Ribosomal_S13
AAA_18
SRP54
AAA_17
cobW
SMC_N
MeaB
ABC_tran
AAA_16
AAA_14
ResIII
Motif
Other DBs
NCBI-ProteinID:
AYE34757
UniProt:
A0A9N7PM77
LinkDB
All DBs
Position
2242591..2244822
Genome browser
AA seq
743 aa
AA seq
DB search
MEILNGIVETIVFKSDDTGYVVSKIRIDKETINAVGVAPFLKEGQQVKIKGQWVIHKQFG
RQFNIEEYEEVLPNSVEGIEKYLSTGIIHGIGPVTAKKIVQKFGVDTLDILDNHIERLKE
IEGIGERKFKIIYESYIEQQGLKDIMIYFQSHGITTNQCIKIYKKYGDQSRYVVEENPYV
LSDEISGIGFITADKIAKNIGIEITSPYRVQSGIRYVLNQFSASGNTYMPKEQLIDEVAK
VLVVDKELVEENIYNCSLEGKIKIEKIGDIEGVFLLPYYYCELGVTNKIITLGIENFRTI
NTDIEFEIKSFEKKNNIEFAQSQREAIIGAFDNGIEIITGGPGTGKTTIIKAIIEIYENN
GMNVLLAAPTGRAAKRMTESTGREAKTIHRLLEMGVSDDENSFFGKGETSPLEGDVVIID
EASMIDIMLMHNLLKAIKLGTRLIIVGDVDQLPSVGAGNVLKDLIESNFIKVVRLKDIFR
QGKESMIVTNAHKINNGEMPQTNRKDGDFFFENKQDLDDILNTIIDLINRRLPKFNNNWD
KLRDMQVLTPTRKGTLGVQNLNNKLQEVLNPKASYKKEKSLKEVIFREGDKVMQTKNNYS
LKWFRINGEGDNEGVGVFNGDMGFIESINEDEKTITIIFDDERKVIYDYIYIDELELAYA
ITIHKSQGSEFKVIITPAFMGSPFLMNKNLLYTGITRAKELVVVVGVPKALKYMVSNVRS
MDRYSSLKERILDITSKEVFSEE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcctaaatggaatagtagaaacgattgtatttaaaagtgatgatacaggatat
gtagtttcaaaaataagaatagataaagagacaattaatgctgttggtgttgcacctttt
ttaaaagagggtcagcaagtaaagattaaaggtcagtgggtaatacataaacaatttgga
agacaatttaatatagaggaatacgaagaagttttacctaattcagttgaaggaatagaa
aaatacttaagtacaggaataatacatggaataggaccggtaactgctaagaaaatagtt
caaaaatttggcgttgatacactggatattttagataatcatatagaaagacttaaagaa
atagaggggataggtgaaaggaaattcaaaataatatatgaatcctacattgagcagcag
ggcttaaaggatattatgatttattttcaaagtcatggaattacaactaatcaatgcata
aaaatatataaaaaatatggagatcaatcaagatatgtggttgaagaaaatccttatgtg
ctttcagatgaaatatctggaataggatttataacagcagataaaatagctaaaaatatt
ggaattgaaattacctctccttatagagttcaaagtggaataagatatgttttaaatcaa
ttttcagcatcaggtaatacgtatatgccaaaagaacaattaattgatgaagtagctaag
gtgttagttgttgataaagagttagtagaagaaaatatatataattgcagtttagaaggt
aaaataaaaatagagaaaattggtgatatagaaggggtatttttactaccatattattat
tgtgaattaggtgtaacaaataaaataataactttaggtatagaaaattttagaacaata
aatacggatattgaatttgagataaaatcttttgaaaagaaaaataatatagaattcgca
caatcacaaagagaggctataataggggcttttgataatggaatagaaataataacaggc
ggaccaggtacaggaaaaactacaattataaaggctataatagaaatttatgaaaacaat
ggaatgaatgtactattagctgcacctacaggaagagctgcaaaaagaatgactgaatct
acaggaagagaagctaaaactatacatagactacttgaaatgggagttagtgatgatgaa
aattctttttttggaaaaggagaaacatctccactagaaggagacgtagtaattatagat
gaggcatcgatgattgatataatgcttatgcataacctattgaaagcaataaagttagga
actcgattaattatagttggagatgtagatcaattaccatcagttggggcaggaaatgtt
cttaaagatcttatagaaagtaattttattaaagttgtaagacttaaggatatttttaga
caaggaaaagagagcatgattgtaacaaatgcgcataagataaataatggagaaatgcct
caaactaatagaaaagatggggatttcttttttgaaaataagcaagatttagatgacata
ttaaatacaataatagatttaataaatagaagattacctaaatttaacaataattgggat
aaacttagagatatgcaagttttaacaccaactagaaaaggaactttaggcgttcaaaat
ctaaataataaacttcaagaagtattaaaccctaaagcatcttataagaaggaaaaatct
ttaaaagaagttatctttagagaaggggataaagtaatgcaaactaaaaataattattcc
cttaaatggtttagaataaatggagaaggagataatgaaggtgttggtgtatttaatgga
gatatgggatttatagaaagtataaatgaagatgaaaaaacaattacaataatttttgat
gatgagagaaaagttatatatgattatatatatatagatgagttagaattagcttatgcc
ataacaattcataaaagtcaaggaagtgaatttaaggttataattacaccagcatttatg
ggttctccttttttaatgaataagaatcttttatatacaggaataacaagggctaaagag
cttgtagtggttgttggagttcctaaagcattaaaatatatggtttctaatgttagaagc
atggatagatattcttctcttaaagagagaatcttagatataacatcaaaagaagttttt
agtgaagaataa
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