Comamonas serinivorans: CCO03_13950
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Entry
CCO03_13950 CDS
T04892
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cser
Comamonas serinivorans
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cser03016
]
CCO03_13950
Enzymes [BR:
cser01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CCO03_13950
Transfer RNA biogenesis [BR:
cser03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCO03_13950
Prokaryotic type
CCO03_13950
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ARU05640
UniProt:
A0A1Y0EQD4
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All DBs
Position
complement(3281259..3282389)
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AA seq
376 aa
AA seq
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MTGPSPGGRAPVGGAESRTDLDGVATPAQDARRAPSARIQRRPVHGVVLLDKPLTWSSNQ
ALQKVKWLLRAEKAGHTGTLDPLATGVLPLCFGAATKFSQLQLDAPKTYEATVLLGVRTT
TADAEGEVVARVTVTPDMLTPERLAAVRARFTGAIAQVPPMHSALKKDGKALYEYARAGV
EVERAPRQVDIHALDMQLACNDAGEPVLHLTVRCSKGTYIRTLGEDIGLALGCGGHLTRL
RRVETGGLLAAQCVTIEQLETMSEAQRLAAVQPTDCLLAGHTRVDLPAHDAGRFLSGMRR
RGPWANSDAVAVYGQNPVALLGVAHVYSGELIPDRLLSPAEVEQTLVQAWGMQQAGEPGH
GHAAQPTGQDAPATGR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgacagggccatccccagggggacgtgcccccgtggggggggccgagtcccggaccgac
ctcgacggtgttgcgaccccggcgcaggatgcgcgccgcgcgccgagtgcgcgcatccag
cgccgccccgtgcatggcgtcgtgctgctcgacaagccgctgacctggtccagcaaccag
gccttgcaaaaggtgaagtggctgctgcgcgcggaaaaagccggccacaccggcacgctg
gaccccttggccacgggggtgctgccgctgtgctttggtgccgccaccaaattcagccag
ctgcagctcgatgcgcccaagacctatgaagccacggtgctgctgggcgtgcgcaccacc
accgccgatgccgaaggggaggtcgtcgcgcgcgtcaccgtcacaccggacatgttgacg
ccggagcgcctggctgccgtgcgcgcccggttcaccggggcgattgcgcaggtgccgccc
atgcacagcgcgctgaaaaaggatggcaaggcgctgtatgagtacgcgcgtgcgggcgtc
gaggtggagcgcgcgccgcgccaggtcgacattcacgcgctggacatgcagttggcctgt
aatgacgcaggtgaacccgttttgcatttgaccgtgcgctgcagcaaaggcacttacatc
cgcaccctgggcgaagacatcgggctggcgctgggctgcggcggccacctcacgcgcctg
cgccgtgtggagacgggcggcctgctggccgcgcagtgcgtgaccatcgaacagctcgaa
accatgtccgaggcgcagcgtctggctgccgtgcagcccaccgactgcctgttggcgggc
cacacgcgcgtcgatctgcctgcgcatgacgcggggcgcttcctgtccggcatgcgccgt
cgtggcccctgggccaacagcgacgcggtggcggtgtatgggcaaaatcccgtggccctg
ctgggtgtcgcccatgtgtactcaggtgagctgattcccgatcgcttgctgagcccggcc
gaggtcgagcagacgctggtgcaggcgtgggggatgcagcaagccggtgagccaggccat
ggacacgccgcgcagcccaccggtcaggacgcaccggcgacgggccgctga
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