Coccomyxa subellipsoidea: COCSUDRAFT_19229 Help Entry COCSUDRAFT_19229  CDS       T02914                                  Name (RefSeq) antiviral helicase   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism csl  Coccomyxa subellipsoidea Pathway csl03018   RNA degradation Brite KEGG Orthology (KO) [BR:csl00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     COCSUDRAFT_19229  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csl03019]     COCSUDRAFT_19229 Enzymes [BR:csl01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      COCSUDRAFT_19229 Messenger RNA biogenesis [BR:csl03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      COCSUDRAFT_19229   mRNA degradation factors    3'-5' decay     Ski complex      COCSUDRAFT_19229 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT DEAD MTR4_beta-barrel MTR4-like_stalk Helicase_C ResIII ATPase_2 DUF3516 GRP Motif Other DBs NCBI-GeneID:  17037618 NCBI-ProteinID:  XP_005644190 JGI:  19229 UniProt:  I0YMM7 LinkDB All DBs AA seq 1038 aa AA seqDB search MVCHCAGPSANGTTEPVLQNGTHAATDTTPLLGQRFVPPSPATTSGRELQGKQHTTAWAV RGGVEDLAGDFERLRPNMAHHFPFELDNFQKEAIVHLERGHSVFVAAHTSAGKTAVAEYA LALAAKHCTRAIYTSPIKTISNQKFRDFSSDFEVGLLTGDVSIKPESPCLIMTTEILRSM LYKGADIIRDIEWVIFDEVHYVNDAERGVVWEEVIIMLPAHVNLILLSATVPNVMEFADW VGRTKRKRIYVTGTTKRPVPLEHNLFYNGALYTICRANTFAPEGVAAARNAWKKKNAKPE TKKDEKRARPTGRGDGGGPAQRGGRQPAGGGRGGRGGGSQGNSGLRSEKSAWMALIDDLK KKALLPVVVFCFSKKRVDLLADNLSNLDLATAAEKSEIQVFCERALGRLRGADRELPQIL RVREMLKRGLGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVIFQSLR KHDGKEFRNLLSGEYTQMAGRAGRRGLDPVGTVIIACWDDVYEEGELKKLLTGRATKLES QFRLTYSMILNLLRVEDLKVEDMLKRSFAEFHAQRAAPEALEGLRLGQQRLAALRARPWP SSFLGTCREAVEQYFSLSQRIEALSSRDVQESVMGSRAASQALVPGRVVLVTNRSTGLPE LGAVCGAPASASKGIQLGNTVSSGKQQNQESMRDENDQTNFSGKRSDHVNVDPGMACWSM QVDTSRIEAICRAKVKLNPDSVLDPEATQGLAHVVRQLQQLQAGPEGQPALMDPIADLKL NQLDIAEAVRERQHLLQARSSMACHRDPGMGEMYAIVRSEALLAGRLAALAHQVSDASLA QMPEFRQRVDVLRRMHYLAEDDTVQMKGRVACEINSGDELVATEMIFAGVLTELTPEEAV ALLSALVFQKSDVEAAAPTEALADACDHAVALAYEAGRMQQECGMDVLPEEYARGALKFG LVEVVYHWARGVPFKDICALTDVMEGSIVRAIVRLDETCREVKDAAKVMGSTALVAQMEA ASAAIKRDVIFAASLYVA NT seq 3117 nt NT seq  +upstreamnt  +downstreamnt atggtctgccattgtgcagggccttcggcaaacggcacaacagagcctgtgctgcagaat ggcacacatgccgccacagacacaactcctcttctggggcagcgctttgtgccgccttca cctgcaaccacctcagggagagagctgcaagggaagcagcacaccacagcgtgggcagtg cgcgggggagtggaggatctggcaggggactttgaacggctgaggcccaacatggcgcac cacttcccctttgaactggacaacttccagaaggaggccattgtgcacctcgagagggga cacagtgtttttgtggcggcgcacaccagtgcagggaagacagccgtggcggagtatgcg ctggcgctagcagccaagcactgcactcgcgccatctacacttcccccataaagaccatc tccaaccagaagttcagggacttcagcagcgacttcgaggttggcttgctgacaggggac gtgagcataaagcctgagtcgccctgcctgatcatgacgaccgagattctgcgctccatg ctgtataagggcgccgacatcatccgtgacatcgagtgggtcatcttcgacgaggtgcac tatgtaaatgatgccgagcgcggcgttgtttgggaggaggtgatcatcatgctgccggcg catgtgaacttgattctgttgtcggccacggtgccgaacgtgatggaatttgctgactgg gtcggccgcaccaagcgcaagcgcatctacgtcaccggcaccaccaagcgcccggtgccc ctggagcacaacctgttctacaacggcgccctctacaccatctgccgcgccaacaccttc gcacccgagggagtagcggcggcgcgcaacgcatggaagaagaagaacgcaaagccggag acgaagaaggacgagaagcgcgcgcggccgacgggccggggtgatggtggcggtccagcc cagcggggcggccggcagccggccggcggggggcgcggggggcgcggcggggggtcccag ggcaacagcgggctgcgctcggagaagtccgcctggatggcccttattgatgacctgaag aagaaggcgctgctgccagtggtggtcttctgcttttccaagaagagggtggacctgctg gcggacaacctcagcaacctcgacctggcgacggcagcggaaaagagcgagatccaggtt ttctgcgagcgcgcgctcggccggctgcgcggggcggaccgggagctgccgcagattctg cgcgtgcgcgagatgctcaagcgcggcctcggcgtgcaccacgcaggtctgctgccgata gtgaaggaggtggtggagatgctgttctgcagaggcgtcatcaaggtgctcttctccacc gagacttttgccatgggagtcaacgcccccgcacgcaccgtcatcttccagtctctgcgc aagcacgacggcaaggagtttaggaatctgctgtcgggggagtacacccagatggcgggc agggcgggcaggagagggctggacccggtgggcacagtcatcatcgcgtgctgggatgac gtgtacgaggagggggagctgaagaagctgctgactgggcgtgcgactaagctggagagc cagttcaggctcacctactccatgatcctcaacctgctgcgagtcgaggacctcaaggtg gaggacatgctgaagcgcagctttgcagagttccatgcgcagagggcggcaccggaggcg cttgagggcttgcgattggggcagcaacggctggcagcgcttcgcgcgcgcccctggcca tccagcttccttggcacctgccgggaagctgtcgagcagtacttctccctctcgcagcgc atcgaagccctctcttcaagagatgtgcaggagagcgtgatggggtctcgggcggccagt caggcgctggtgccgggaagggtggtgctggtgactaacaggagcaccgggctgccagag cttggcgctgtttgtggagcccctgccagtgccagcaagggcatccagcttggcaacact gtgagctctggtaagcagcaaaatcaagagagcatgagagatgagaatgaccagaccaac ttctcagggaagcgaagtgaccatgtaaatgtagaccccggaatggcttgttggagcatg caggtggacaccagccgaatagaagccatctgcagggccaaggtgaagctgaacccagac agcgtgctggacccagaggccacccaggggctagcccatgtggtccgccagctgcagcag ctgcaggcggggcctgaggggcagccagcgctgatggacccaatagcagacctcaagctc aatcagctggacattgcagaggctgtgcgcgagcgccagcatctcctgcaggcaaggagc agcatggcgtgccaccgggacccaggcatgggtgagatgtatgcaattgtgcgctccgaa gctctgctagctggcagactcgctgcacttgcccaccaggtgagcgatgccagcctggca cagatgcctgagttcaggcagcgggtggatgtcctgcggcgcatgcactacctggcagaa gacgacactgtgcagatgaaggggcgggtggcatgcgagatcaactctggcgatgagctg gtggccacggagatgatctttgctggggtgctgacagagctcacgcctgaggaggctgtg gctctgctatcagcactcgtcttccagaagagcgacgtggaggcggctgcgccaacagag gcgctggcggacgcatgcgatcacgcagtggcgctggcttatgaggccggccgcatgcag caggagtgtggcatggacgttctgccggaggagtacgcgcgaggcgccctcaaatttggc cttgttgaggtggtgtaccactgggcgcgcggcgttcccttcaaggacatctgcgcgctg acagacgtgatggaggggtcaatagtgcgcgccatcgtgcgactggacgagacctgccgg gaagtcaaggacgccgccaaggtcatgggcagcaccgcgctcgttgcccaaatggaagcc gcctccgccgccatcaaacgcgacgtcatttttgcggcctccctctatgtcgcctga

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